Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4210 cluster # 4210       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4210#0 length = 902 sequences # 3  
consensusID : consensus_4210#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 902
fasta sequence 
                              [CACAAGGCGGCCCGCTCCCAGGTTTGATCACGCCACCAAAGAGACACCGCACATAGGAATGCCGCGACGAATGCCGTGTGTGCCAGGTCAATCAGGGCAACATGGCTAAAGGCCAGGACAAGAGGGCAGGAGTTAAGGATGAATATTGTCAAACATGCTTTGGCTCTGTCACCAAGCAATACCTTCGACAATACGAAACTCGAAATGTTCAAAATCAGCAGGTGAATCGCGAGAATAAAATGCTCAGAATAAAGCGAATCACCTACAAAAACTTTGCAAAGCCCATTGAAAGCCCAGACTCCCGCCGGATACAAAGGCTGTGTTGTGACTAAAGGTAATAAGGTATCCAGGCGCCACTGAGAAGGCTTGCAAATCCATTGTCTAAACGCCGTGCTAATTGCACAGTGCCAGGATGCGTCATGAACTGGAAGTGTATTATCTGCATTGGCCCACGTCAAGGCAAGCAGCAGTGCGAAGAAAATGATAACGATAGGAGCAAGCCTTGTGCTTAGCAAGTGCTCCAGCNCAGC-TTTGTTTGCAACTGTTCTTTCAGCGGGGGCTTTGATTGTTTTGCTTGGTGTGGCTGGCATCTGACCTGAGTTCTCAAAAAGAACCAAAACTCTGCTTCTACTCAAAATTGAGAGATAACAAGAAGCAATTATCACACGCTTGGGCATGATATTTTGAGCGCTGCAGATTATCTCAGCTTCAGGAATTTCATAAACCTACAGACGAATCGCTAAAGCGTCTTTGGACGCAAGATTTCTTTGTCCCGGAAAGAAAGTTATCCATTTCTCAGCTCTTGTAGCAGCAGAATTTTTTGCAAGCCATTTTCCTAAGGTTGTCGAAAAATCGCTGGCTCCAAGCCTGTTTAAATGGCAGCCTGTAATAAAGTCTTCTTC]

[+] EMBL CD122423             [CACAAGGCGGCCCGCTCCCAGGTTTGATCACGCCACCAAAGAGACACCGCACATAGGAATGCCGCGACGAATGCCGTGTGTGCCAGGTCAATCAGGGCAACATGGCTAAAGGCCAGGACAAGAGGGCAGGAGTTAAGGATGAATATTGTCAAACATGCTTTGGCTCTGTCACCAAGCAATACCTTCGACAATACGAAACTCGAAATGTTCAAAATCAGCAGGTGAATCGCGAGAATAAAATGCTCAGAATAAAGCGAATCACCTACAAAAACTTTGCAAAGCCCATTGAAAGCCCAGACTCCCGCCGGATACAAAGGCTGTGTTGTGACTAAAGGTAATAAGGTATCCAGGCGCCACTGAGAAGGCTTGCAAATCCATTGTCTAAACGCCGTGCTAATTGCACAGTGCCAGGATGCGTCATGAACTGGAAGTGTATTATCTGCATTGGCCCACGTCAAGGCAAGCAGCAGTGCGAAGAAAATGATAACGATAGGAGCAAGCCTTGTGCTTAGCAAGTGCTCCAGCNCAGC TTTGTTTGCAACTGT                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD122461             [CACAAGGCGGCCCGCCCCCAAGTTTGATCACGCCACCAAAGAGACACCGCACATAGGAATGCCGCGACGAATGCCGTGTGTGCCAGGTCAATCAGGGCAACATGGCTAAAGGCCAGGACAAGAGGGCAGGAGTTAAGGATGAATATTGTCAAACATGCTTTGGCTCTGTCACCAAGCAATACCTTCGACAATACGAAACTCGAAATGTTCAAAATCAGCAGGCGAATCGCGAGAATAAAATGCTCAGAATAAAGCGAATCACCTACAAAAACTTTGCAAAGCCCATTGAAAGCCCAGACTCCCGCCGGATACAAAGGCTGTGTTGTGACTAAGGGTAATAAGGTATCCAGGCGCCACTGAGAAGGCTTGCAAATCCATTGTCTAAACGCCGTGCTAATTGCACAGTGCCAGGATGCGTCATGAACTGGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD122420             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GATAACGATAGGAGCAAGCCTTGTGCTTAGCAAGTGCTCCAGC CAGCTTTTGTTTGCAACTGTTCTTTCAGCGGGGGCTTTGATTGTTTTGCTTGGTGTGGCTGGCATCTGACCTGAGTTCTCAAAAAGAACCAAAACTCTGCTTCTACTCAAAATTGAGAGATAACAAGAAGCAATTATCACACGCTTGGGCATGATATTTTGAGCGCTGCAGATTATCTCAGCTTCAGGAATTTCATAAACCTACAGACGAATCGCTAAAGCGTCTTTGGACGCAAGATTTCTTTGTCCCGGAAAGAAAGTTATCCATTTCTCAGCTCTTGTAGCAGCAGAATTTTTTGCAAGCCATTTTCCTAAGGTTGTCGAAAAATCGCTGGCTCCAAGCCTGTTTAAATGGCAGCCTGTAATAAAGTCTTCTTC]




>consensus_4210#0
CACAAGGCGGCCCGCTCCCAGGTTTGATCACGCCACCAAAGAGACACCGCACATAGGAAT
GCCGCGACGAATGCCGTGTGTGCCAGGTCAATCAGGGCAACATGGCTAAAGGCCAGGACA
AGAGGGCAGGAGTTAAGGATGAATATTGTCAAACATGCTTTGGCTCTGTCACCAAGCAAT
ACCTTCGACAATACGAAACTCGAAATGTTCAAAATCAGCAGGTGAATCGCGAGAATAAAA
TGCTCAGAATAAAGCGAATCACCTACAAAAACTTTGCAAAGCCCATTGAAAGCCCAGACT
CCCGCCGGATACAAAGGCTGTGTTGTGACTAAAGGTAATAAGGTATCCAGGCGCCACTGA
GAAGGCTTGCAAATCCATTGTCTAAACGCCGTGCTAATTGCACAGTGCCAGGATGCGTCA
TGAACTGGAAGTGTATTATCTGCATTGGCCCACGTCAAGGCAAGCAGCAGTGCGAAGAAA
ATGATAACGATAGGAGCAAGCCTTGTGCTTAGCAAGTGCTCCAGCNCAGCTTTGTTTGCA
ACTGTTCTTTCAGCGGGGGCTTTGATTGTTTTGCTTGGTGTGGCTGGCATCTGACCTGAG
TTCTCAAAAAGAACCAAAACTCTGCTTCTACTCAAAATTGAGAGATAACAAGAAGCAATT
ATCACACGCTTGGGCATGATATTTTGAGCGCTGCAGATTATCTCAGCTTCAGGAATTTCA
TAAACCTACAGACGAATCGCTAAAGCGTCTTTGGACGCAAGATTTCTTTGTCCCGGAAAG
AAAGTTATCCATTTCTCAGCTCTTGTAGCAGCAGAATTTTTTGCAAGCCATTTTCCTAAG
GTTGTCGAAAAATCGCTGGCTCCAAGCCTGTTTAAATGGCAGCCTGTAATAAAGTCTTCT
TC

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)