Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4223 cluster # 4223       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4223#0 length = 581 sequences # 3  

consensusID : consensus_4223#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 581
fasta sequence
                              [GAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTGACTGAAGGCAATGGTGAAAGTGTCACTGAATTTCGTGGATCAGTTGAATTTTGAAATGAACATGGTTGGTTGATTGATTAGTGTTCTTGAGTTTGAGGGCTTGCGCACAAACCATTGAAATGCCGTGTTCTTATTTTGAGAGGCGGTATAGTGGAAGCGCACTGCTGAGTGGCATAGCAATAAATGCAAAGGCTGCTCAGTTTGTTCAGGTTTTCCATGACGGTCTATCTACAATTGATTCATGATCAAAACTATTTACCCTACAAAATTATGCACAAAACCACTTCTCATATTAGTGAACACGTGCTCTCTAGTGACTGATTTCAACAGATATTTCCTGGAATTCTGATGAGACGCAAAGATGAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTCACTGAAAGCAATGGTGGATGTGTCCCTGAATCTCGGGGGATCGGTTGAATTTTGAAATGAACACGGTTTGATACCGGATGATTATTGTTGAGTTTGACCGTTGTTTCAATAAAACTGATAGGCGGCTATGTTCTAATCCTCG]

[+] EMBL CD149442             [GAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTGACTGAAGGCAATGGTGAAAGTGTCACTGAATTTCGTGGATCAGTTGAATTTTGAAATGAACATGGTTGGTTGATTGATTAGTGTTCTTGAGTTTGAGGGCTTGCGCACAAACCATTGAAATGCCGTGTTCTTATTTTGAGAGGCGGTATAGTGGAAGCGCACTGCTGAGTGGCATAGCAATAAATGCAAAGGCTGCTCAGTTTGTTCAGGTTTTCCATGACGGTCTATCTACAATTGATTCATGATCAAAACTATTTACCCTACAAAATTATGCACAAAACCACTTCTCATATTAGTGAACACGTGCTCTCTAGTGACTGATTTCAACAGATATTTCCTGGAATTCTGATGAGACGCAAAGATGAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTCACTGAAAGCAATGGTGGATGTGTCCCTGAATCTCGGGGGATCGGTTGAATTTTGAAATGAACACGGTTTGATACCGGATGATTATTGTTGAGTTTGACCGTTGTTTCAATAAAACTGATAGGCGGCTATGTTCTAATCCTCG]
[+] EMBL CD149463             [GAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTGACTGAAGGCAATGGTGAAAGTGTCACTGAATTTCGTGGATCAGTTGAATTTTGAAATGAACATGGTTGGTTGATTGATTAGTGTTCTTGAGTTTGAGGGCTTGCGCACAAACCATTGAAATGCCGTGTTCTTATTTTGAGAGGCGGTATAATGGAAGCGCACTGCTGAGTGGCATACCAATAAATGCAAAGGCTGCTCACTTTGTTCAGGTTTTCCATGACGGTCTATCTACAATTGATTCATGATCAAAACTATTTACCCTACAAAATTATGCACAAAACCACTTCTCATATTAGTGAACACGTGCTCTCTAATGACTGATTTCAACAGATATTTCCTGGAATTCTGATGATAC                                                                                                                                                                                            ]
[-] EMBL CD127657             [                                                                                                                      ggGTTCTTGAGTTTGAGGGCTTGCGCGCAAACCATTAAAATGCCGTGTTCTTATTTTGAGAGGCGGTATAGTGAAAGCGCATTAGTGAGTGGCATAGCAATAAATGCAATGGCTGCTCAGTTTGTTCAGGTTTTCCATGACGGTCTATCTACAATTGATTCATGATCAAAACTATTTACCCTACAAAATTATGCACAAAACCACTTCTCATATTAATGAAAACGAGCTCTCTATTGACTGACTTCAAAACGTATTTCATGGAGTTCTGATGAGACGCAGAGATGAG                                                                                                                                                                                 ]


>consensus_4223#0 GAGTGGAGCTGAAACAGGTTTGTTTTGAATAATATCTGACTGAAGGCAATGGTGAAAGTG TCACTGAATTTCGTGGATCAGTTGAATTTTGAAATGAACATGGTTGGTTGATTGATTAGT GTTCTTGAGTTTGAGGGCTTGCGCACAAACCATTGAAATGCCGTGTTCTTATTTTGAGAG GCGGTATAGTGGAAGCGCACTGCTGAGTGGCATAGCAATAAATGCAAAGGCTGCTCAGTT TGTTCAGGTTTTCCATGACGGTCTATCTACAATTGATTCATGATCAAAACTATTTACCCT ACAAAATTATGCACAAAACCACTTCTCATATTAGTGAACACGTGCTCTCTAGTGACTGAT TTCAACAGATATTTCCTGGAATTCTGATGAGACGCAAAGATGAGTGGAGCTGAAACAGGT TTGTTTTGAATAATATCTCACTGAAAGCAATGGTGGATGTGTCCCTGAATCTCGGGGGAT CGGTTGAATTTTGAAATGAACACGGTTTGATACCGGATGATTATTGTTGAGTTTGACCGT TGTTTCAATAAAACTGATAGGCGGCTATGTTCTAATCCTCG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)