Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4416 cluster # 4416       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4416#0 length = 740 sequences # 3  

consensusID : consensus_4416#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 740
fasta sequence
                              [TCATACATCTCCATTCTGTTAACCAGCTCTTCACTATCTCTTGTTACAAAACCATCCACACACTCAACGTCCGTTTCGTCAAAATGCGCTACTCGAAACCCGCTTAAATATTCGTTAAAAACTGAAACTGTCTCTTCAGAATCAGCCATCATTTTAGAACGATCCAGGAGTTTGGAAATAACCTGTGAATCATATACAATTCTTTGATAAGTATCCTTCGATTCAATCTCATCTACTCGAGCCGCATCGTACAAATCCTTTGTAGTGTAAGGATCATCTGAAGCAAATAGAGCTTCTACACCTGAGCGTAATAGTTCGTCCATTTCTGAACGTGTTAGCCTGCTTACTGATTTAGTATTAGATTGTCTTTGTGTTGATTCTACAAGATTAGTATCTTGATCAGATCTGGAGATGCAATCTTGGTTAATTCTAGAGTTATCAACATTTGAGTCTGTTTTTGGTGAGTTATTGTCTTGAGTCGAGTCATGCTGATTTGATGCAGGACTTGAAGAAATTTCCGGTGCCTTTGGATATTTCTGATTATGATCGACAATTAACTGAGTAAGGGCAAGTTTACGCCTAGCCACTTGAGATATTTTCTCTTCAATACTGTGACGTGTTATGAACCGATAAATAACAACATGCTTGGACTGACCAATTCGATGAGCCCGAGAAAGGGCTTGTAAATCCCATTGAGGATTCCAATCGGAATCATACAGTACGACTGTATCAGCTCCACC]

[+] EMBL CD067198             [TCATACATCTCCATTCTGTTAACCAGCTCTTCACTATCTCTTGTTACAAAACCATCCACACACTCAACGTCCGTTTCGTCAAAATGCGCTACTCGAAACCCGCTTAAATATTCGTTAAAAACTGAAACTGTCTCTTCAGAATCAGCCATCATTTTAGAACGATCCAGGAGTTTGGAAATAACCTGTGAATCATATACAATTCTTTGATAAGTATCCTTCGATTCAATCTCATCTACTCGAGCCGCATCGTACAAATCCTTTGTAGTGTAAGGATCATCTGAAGCAAATAGAGCTTCTACACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CD067199             [   gagATCTCCATTCTGTTAGCCTGCTCTTCACTATCTCTTGTTACAAAACCATCCACAGACTCAGCGTCCGTTTCGTCAAAATGCGCTACTCGAAACCCGCTTAAATATTCGTTAAAAGCTGAAACTGTCTCTTCGGAATCAGCCATCATTTTTGAACGATCCAGGAGTTTGGAAATAGCCTGTGAATCATATACAATTCTTTGATAAGTATCCTTCGATTCAATCTCATCTACTCGAGCCGCATCGTACAAATCCTTTGTAGTGTAAGGATCATCTGAAGCAAATAGAGCTTCTACACCTGAGCGTAATAGTTCGTCCATTTCTGAACGTGTTAGCCTGCTTACTGATTTAGTATTAGATTGTCTTTGTGTTGATTCTACAAGATTAGTATCTTGATCAGATCTGGAGATGCAATCTTGGTT                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD067511             [                                                                                                                                                                                                                                                                                                                                                                                 TGTGTTGATTCTACAAGATTAGTATCTTGATCAGATCTGGAGATGCAATCTTGGTTAATTCTAGAGTTATCAACATTTGAGTCTGTTTTTGGTGAGTTATTGTCTTGAGTCGAGTCATGCTGATTTGATGCAGGACTTGAAGAAATTTCCGGTGCCTTTGGATATTTCTGATTATGATCGACAATTAACTGAGTAAGGGCAAGTTTACGCCTAGCCACTTGAGATATTTTCTCTTCAATACTGTGACGTGTTATGAACCGATAAATAACAACATGCTTGGACTGACCAATTCGATGAGCCCGAGAAAGGGCTTGTAAATCCCATTGAGGATTCCAATCGGAATCATACAGTACGACTGTATCAGCTCCACC]


>consensus_4416#0 TCATACATCTCCATTCTGTTAACCAGCTCTTCACTATCTCTTGTTACAAAACCATCCACA CACTCAACGTCCGTTTCGTCAAAATGCGCTACTCGAAACCCGCTTAAATATTCGTTAAAA ACTGAAACTGTCTCTTCAGAATCAGCCATCATTTTAGAACGATCCAGGAGTTTGGAAATA ACCTGTGAATCATATACAATTCTTTGATAAGTATCCTTCGATTCAATCTCATCTACTCGA GCCGCATCGTACAAATCCTTTGTAGTGTAAGGATCATCTGAAGCAAATAGAGCTTCTACA CCTGAGCGTAATAGTTCGTCCATTTCTGAACGTGTTAGCCTGCTTACTGATTTAGTATTA GATTGTCTTTGTGTTGATTCTACAAGATTAGTATCTTGATCAGATCTGGAGATGCAATCT TGGTTAATTCTAGAGTTATCAACATTTGAGTCTGTTTTTGGTGAGTTATTGTCTTGAGTC GAGTCATGCTGATTTGATGCAGGACTTGAAGAAATTTCCGGTGCCTTTGGATATTTCTGA TTATGATCGACAATTAACTGAGTAAGGGCAAGTTTACGCCTAGCCACTTGAGATATTTTC TCTTCAATACTGTGACGTGTTATGAACCGATAAATAACAACATGCTTGGACTGACCAATT CGATGAGCCCGAGAAAGGGCTTGTAAATCCCATTGAGGATTCCAATCGGAATCATACAGT ACGACTGTATCAGCTCCACC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)