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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4553 cluster # 4553       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4553#0 length = 925 sequences # 3  

consensusID : consensus_4553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 925
fasta sequence
                              [GCATGCTTCCAAATTTACCCATGCAATAGTAAAGAAACTTGTGAATTTTCCGGCTGTTGTTAGACAGTCTATTATTGAATCGTGTGAAAAGCTAAAATCTATGGACTATCGTCCAATTTATGAAATTTACGATAATCTAACCGGATTGGATCGTGTTAGATCCTTACATGTTGGAGTCGCTGAAGCTGAAAGAAACTTTGTACAGAAACAAGTCTAAAGGAGAGCTTGTCAAACGGAAGTCTTTCAGTTAGAAGAAGCTAGAAATCGAATTAACATACAACTAGATAGTGTTAAACGTAGTGATGAAAATTTTTTGAAATTAGTTACCGAATTGCACGAGCTTTCACGTCAACACCAACAAGCTCGTGATAAGTTAACGTCTATTGAATTAGCTGAACAAGTAACATTTGAACAATTCTCTAGTATTTTACGTCATTCACAAGCTGAAGAACGTATTCAGGCTAGTCGAATGCGACCATGGACTGTTGGATTCAGTTTAGCTGCTGGTTTGATTGGCTTTAGCGCTACATGGATACGTTTTCGTCAACTTGACAAACAAAATGCATCATCACTTCACTTAACTTCTGCTACCAGTCAACCAACTACTGAGTACTCCTTCCAAGATATAACTTCCTCTCTTCACTCATCCAATCAGATATAGGTAGTATGTGGCACCTATCGAACGTGGAGTGCATGCCTACAGAAGATTGGGAAGACTCAATTGAAGAAAACAGAAAGTAACTGTAATAACAACGGAATTAACAGAATCACAAAGCATGTAAAGGACAGCTGATGGTANATGTGCAAATTATGTAGTTGATGTATAGTTTTCATATTTTGCC-AAACACTGTAATTTTGCACTAAAGAAG-AATTGGCCAT-CCCACTTGAGTGTTTGTTCACTACACTAGGACATTGATTGTGCGCT]

[+] EMBL CD083677             [GCATGCTTCCAAATTTACCCATGCAATAGTAAAGAAACTTGTGAATTTTCCGGCTGTTGTTAGACAGTCTATTATTGAATCGTGTGAAAAGCTAAAATCTATGGACTATCGTCCAATTTATGAAATTTACGATAATCTAACCGGATTGGATCGTGTTAGATCCTTACATGTTGGAGTCGCTGAAGCTGAAAGAAACTTTGTACAGAAACAAGTCTAAAGGAGAGCTTGTCAAACGGAAGTCTTTCAGTTAGAAGAAGCTAGAAATCGAATTAACATACAACTAGATAGTGTTAAACGTAGTGATGAAAATTTTTTGAAATTAGTTACCGAATTGCACGAGCTTTCACGTCAACACCAACAAGCTCGTGATAAGTTAACGTCTATTGAATTAGCTGAACAAGTAACATTTGAACAATTCTCTAGTATTTTACGTCATTCACAAGCTGAAGAACGTATTCAGGCTAGTCGAATGCGACCATGGACTGTTGGATTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CD149666             [                                                                                                                                                                                                                                                  TTCAGTTAGAAGAAGCTAGAAATCGAATTAACATACAACTAGATAGTGTTAAACGTAGTGATGAAAATTTTTTGAAATTAGTTACCGAATTGCACGAGCTTTCACGTCAACACCAACAAGCTCGTGATAAGTTAACGTGTATTGAATTAGCTGAACAAGTAACATTTGAACAATTCTCTAGTATTTTACGTCATTCACAAGCTGAAGAACGTATTCAGGCTAGTCGAATGCGACAATGGACTGTTGGATTCAGTTTAGCTGCTGGTTTGATTGGCTTTAGCGCTACATGGATACGTTTTCGTCAACTTGACAAACAAAATGCATCATCACTTCACTTAACTTCTGCTACCAGTCAACCAACTACTGAGTACTCCTTCCAAGATATAACTTCCTCTCTTCACTCATCCAATCAGATATAGGTAGTATGTGGCACCTATCGAACGTGGAGTGCATGCCTACAGAAGATTGGGAAGACTCAATTGAAGAAAACAGAAAGTAACTGTAATAACAACGGAATTAACAGAATCACAAAGCATGTAAAGGACAGCTGATGGTANATGTGCAAATTATGTAGTTGATGTATAGTTTTCATATTTTGCC AAACACTGTAATTTTGCACTAAAGAAG AATTGGCCAT CCCACTTGAGTGTTTGTTCACTACACTAGGACATTGATTGTGCGC ]
[-] EMBL CD149441             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCATCACTTCACTTAACTTCTGCTACCAGTCAACCAACTACTGAGTACTCCTTCCAAGATATAACTTCCTCTCTTCACTCATCCAATCAGATATAGGTAGTATGTGGCACCTATCGAGCGTGGAGTGCATGCCTACAGAAGATTGGGAAGATTCAATTGAAGAAAACAGAAAGTAACTGTAATAACAACGGAATTAACAGAATCACAAAGCATGTAAAGGACAGCTGATGGTAGATGTGCAAATTATGTAGTTGATGTATAGTTTTCATATTTTGCCAAAACACTGTAATTTTGCACTAAAGAAGAAATTGGCCATCCCCACTTGAGTGTTTGTTCACTACACTAGGACATTGATTGTGCGCT]


>consensus_4553#0 GCATGCTTCCAAATTTACCCATGCAATAGTAAAGAAACTTGTGAATTTTCCGGCTGTTGT TAGACAGTCTATTATTGAATCGTGTGAAAAGCTAAAATCTATGGACTATCGTCCAATTTA TGAAATTTACGATAATCTAACCGGATTGGATCGTGTTAGATCCTTACATGTTGGAGTCGC TGAAGCTGAAAGAAACTTTGTACAGAAACAAGTCTAAAGGAGAGCTTGTCAAACGGAAGT CTTTCAGTTAGAAGAAGCTAGAAATCGAATTAACATACAACTAGATAGTGTTAAACGTAG TGATGAAAATTTTTTGAAATTAGTTACCGAATTGCACGAGCTTTCACGTCAACACCAACA AGCTCGTGATAAGTTAACGTCTATTGAATTAGCTGAACAAGTAACATTTGAACAATTCTC TAGTATTTTACGTCATTCACAAGCTGAAGAACGTATTCAGGCTAGTCGAATGCGACCATG GACTGTTGGATTCAGTTTAGCTGCTGGTTTGATTGGCTTTAGCGCTACATGGATACGTTT TCGTCAACTTGACAAACAAAATGCATCATCACTTCACTTAACTTCTGCTACCAGTCAACC AACTACTGAGTACTCCTTCCAAGATATAACTTCCTCTCTTCACTCATCCAATCAGATATA GGTAGTATGTGGCACCTATCGAACGTGGAGTGCATGCCTACAGAAGATTGGGAAGACTCA ATTGAAGAAAACAGAAAGTAACTGTAATAACAACGGAATTAACAGAATCACAAAGCATGT AAAGGACAGCTGATGGTANATGTGCAAATTATGTAGTTGATGTATAGTTTTCATATTTTG CCAAACACTGTAATTTTGCACTAAAGAAGAATTGGCCATCCCACTTGAGTGTTTGTTCAC TACACTAGGACATTGATTGTGCGCT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)