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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4711 cluster # 4711       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4711#0 length = 687 sequences # 3  

consensusID : consensus_4711#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 687
fasta sequence
                              [TTTGATTGTAATAATTCACAAATTGACACAAAAACAAATTCACCAGAAAGTTATTTTTTTTTAATTGATCACCAAAAACTAATTCAAGAGAAACTCCTTACTACTTGTAGCTATTTCAGTAAACCACACATTTTACAATTAAATTTTAAAAATATGGAAGCAGATAAACTGAATAGATTTAATGAATTAGACGATAATGAAGTTGTTCAGTCCAACCCGATTATGGATATTTCTGAGGAAAATTATCATAACGACTATGACATAGAACATGGAAATTATGAACAAAACGACGATTTTGATCCGGAAATTACAGCTGATTCAAGTTCAGATACATCTTCATACGAAGATAATGAACAACACGCTGTTAAAGAAAATGAAGACGAGATAGAAGGAGGAGAAGAAGGAGTAGAAATAGGATCAAAAGTACATAGTAGTATGATTGGTGAGTATGACTTGGGATATCATCAGCATTATGATAATACCGACTATACTGACGAAGAGGAAATGATATTTACAACATATGCCCAGAATATTAAAGATAATAAAGAAGAGATCAATCCTTTTGCTAATGATGATTTTGGAGATATATCAATAATTACAGCAACAGCAGCTATAGAAAATATAAATAAATCAATTGAACGTATAACAAGCATAGATGAGTTATAAACTATAGCTAGACCACGTGTT]

[+] EMBL CD200524             [TTTGATTGTAATAATTCACAAATTGACACAAAAACAAATTCACCAGAAAGTTATTTTTTTTTAATTGATCACCAAAAACTAATTCAAGAGAAACTCCTTACTACTTGTAGCTATTTCAGTAAACCACACATTTTACAATTAAATTTTAAAAATATGGAAGCAGATAAACTGAATAGATTTAATGAATTAGACGATAATGAAGTTGTTCAGTCCAACCCGATTATGGATATTTCTGAGGAAAATTATCATAACGACTATGACATAGAACATGGAAATTATGAACAAAACGACGATTTTGATCCGGAAATTACAGCTGATTCAAGTTCAGATACATCTTCATACGGAGATAATGAACAACACGCTGTTAAAGAAAATGAAGACGAGATAGAAGGAGGAGAAGAAGGAGTAGAAATAGGATCAAAAGTACATAGTAGTATGATTGGTGAGTATGACTTGGGATATCATCAGCATTATGATAATACCGACTATACTG                                                                                                                                                                                                  ]
[+] EMBL CD133754             [                                                                                                     cACTTGTAGCTATTTCAGTAAACCACACATTTTACAATTAAATTTTAAAAATATGGAAGCAGATAAACTGAATAGATTTAATGAATTAGACGATAATGAAGTTGTTCAGTCCAACCCGATTATGGATATTTCTGAGGAAAATTATCATAACGACTATGACATAGAACATGGAAATTATGAACAAAACGACGATTTTGATCCGGAAATTACAGCTGATTCAAGTTCAGATACATCTTCATACGAAGATAATGAACAACACGCTGTTAAAGAAAATGAAGACGAGATAGAAGGAGGAGAAGAAGGAGTAG                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD180132             [                                                                                                                                                                                                                                                                                                                                                       AAGATAATGAACAACACGCTGTTAAAGAAAATGAAGACGAGATAGATGGAGGAGAAGAAGGAGTAGAAATAGGATCAAAAGTACATAGTAGTATGATTGGTGAGTATGACTTGGGATATCATCAGCATTATGATAATACCGACTATACTGACGAAGAGGAAATGATATTTACAACATATGCCCAGAATATTAAAGATAATAAAGAAGAGATCAATCCTTTTGCTAATGATGATTTTGGAGATATATCAATAATTACAGCAACAGCAGCTATAGAAAATATAAATAAATCAATTGAACGTATAACAAGCATAGATGAGTTATAAACTATAGCTAGACCACGTGTT]


>consensus_4711#0 TTTGATTGTAATAATTCACAAATTGACACAAAAACAAATTCACCAGAAAGTTATTTTTTT TTAATTGATCACCAAAAACTAATTCAAGAGAAACTCCTTACTACTTGTAGCTATTTCAGT AAACCACACATTTTACAATTAAATTTTAAAAATATGGAAGCAGATAAACTGAATAGATTT AATGAATTAGACGATAATGAAGTTGTTCAGTCCAACCCGATTATGGATATTTCTGAGGAA AATTATCATAACGACTATGACATAGAACATGGAAATTATGAACAAAACGACGATTTTGAT CCGGAAATTACAGCTGATTCAAGTTCAGATACATCTTCATACGAAGATAATGAACAACAC GCTGTTAAAGAAAATGAAGACGAGATAGAAGGAGGAGAAGAAGGAGTAGAAATAGGATCA AAAGTACATAGTAGTATGATTGGTGAGTATGACTTGGGATATCATCAGCATTATGATAAT ACCGACTATACTGACGAAGAGGAAATGATATTTACAACATATGCCCAGAATATTAAAGAT AATAAAGAAGAGATCAATCCTTTTGCTAATGATGATTTTGGAGATATATCAATAATTACA GCAACAGCAGCTATAGAAAATATAAATAAATCAATTGAACGTATAACAAGCATAGATGAG TTATAAACTATAGCTAGACCACGTGTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)