Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4810 cluster # 4810       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4810#0 length = 515 sequences # 3  

consensusID : consensus_4810#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 515
fasta sequence
                              [ATGAATCAGATTCGATGTTATGTTCTTGGAATGATTTTTTGGCCCAAGACCTAATACATGATAGGTGGTAAATATGATAACACGTAGCACATGACCATATTGGGTCAGTAACACGAATTTCTGAAATGCATATCATACACTGATATGTGCTGTTGCGCAATCCATCGATAAGGTTACTTCTCAAATTATCATGATTTTTAGGCTCACAATTTACTTTTAAGGTAGTTTTTGGTCGTTGTTGAAAAGACAAGGAAGTATCACTTTCTGAAGAAACCAGTTTGAACTAGGTAGGTGGACTCAACCGAATAGTTTGGATTGGTTGAAGACTCAGAGGTTGATAGCGTCCGAATAATTTGATGGCCATCAAATTCATGTCCGGAATATGGAGAACCTCTTCTGTGGTCAAAGTTCTTGAAGGGGGGCCTAAAAAGCCACTGACAGTCATCGAGGGATTATTTCTCCTATACGGATAGCAAAGGCGGTCACATGGTCTATAATGGTTACGATGTCCAGAC]

[+] EMBL CD142216             [ATGAATCAGATTCGATGTTATGTTCTTGGAATGATTTTTTGGCCCAAGACCTAATACATGATAGGTGGTAAATATGATAACACGTAGCACATGACCATATTGGGTCAGTAACACGAATTTCTGAAATGCATATCATACACTGATATGTGCTGTTGCGCAATCCATCGATAAGGTTACTTCTCAAATTATCATGATTTTTAGGCTCACAATTTACTTTTAAGGTAGTTTTTGGTCGTTGTTGAAAAGACAAGGAAGTATCACTTTCTGAAGAAACCAGTTTG ACTAGGTAGGTGGACTCAACCGAATAGTTTGGATTGCTTGAAGAC                                                                                                                                                                                            ]
[+] EMBL CD198319             [ATGAATCAGATTCGATGTTATGTTCTTGGAATGATTTTTTGGCCCAAGACCTAATACATGATAGGTGGTAAATATGATAACACGTAGCACATGACCATATTGGGTCAGTAACACGAATTTCTGAAATGCATATCATACACTGATATGTGCTGTTGCGCAATCCATCGATAAGGTTACTTCTCAAATTATCATGATTTTTAGGCTCACAATTTACTTTTAAGGTAGTTTTTGGTCGTTGTTGAAAAGACAAGGAAGTATCACTTTCTGAAGAA  CAGTTTGAACTAGGTAGGGGGACTCAACAGAATAGGTTGCATTGGTTGAAGAC                                                                                                                                                                                            ]
[-] EMBL BG931356             [                                                                                                                                                                                                                                          GTTGTTGAAAAGACAAGGAAGTATCACTTTCTGAAG AACCAGTTTGAACTAGGTAGGTGGACTCAACCGAATAGTTTGGATTGGTTGAAGACTCAGAGGTTGATAGCGTCCGAATAATTTGATGGCCATCAAATTCATGTCCGGAATATGGAGAACCTCTTCTGTGGTCAAAGTTCTTGAAGGGGGGCCTAAAAAGCCACTGACAGTCATCGAGGGATTATTTCTCCTATACGGATAGCAAAGGCGGTCACATGGTCTATAATGGTTACGATGTCCAGAC]


>consensus_4810#0 ATGAATCAGATTCGATGTTATGTTCTTGGAATGATTTTTTGGCCCAAGACCTAATACATG ATAGGTGGTAAATATGATAACACGTAGCACATGACCATATTGGGTCAGTAACACGAATTT CTGAAATGCATATCATACACTGATATGTGCTGTTGCGCAATCCATCGATAAGGTTACTTC TCAAATTATCATGATTTTTAGGCTCACAATTTACTTTTAAGGTAGTTTTTGGTCGTTGTT GAAAAGACAAGGAAGTATCACTTTCTGAAGAAACCAGTTTGAACTAGGTAGGTGGACTCA ACCGAATAGTTTGGATTGGTTGAAGACTCAGAGGTTGATAGCGTCCGAATAATTTGATGG CCATCAAATTCATGTCCGGAATATGGAGAACCTCTTCTGTGGTCAAAGTTCTTGAAGGGG GGCCTAAAAAGCCACTGACAGTCATCGAGGGATTATTTCTCCTATACGGATAGCAAAGGC GGTCACATGGTCTATAATGGTTACGATGTCCAGAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)