Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4889 cluster # 4889       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4889#0 length = 598 sequences # 3  

consensusID : consensus_4889#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 598
fasta sequence
                              [ACATTTAGATTTCATTATAAAAATGATTCATCCAATTTGTTTCGGGTTTCACTATTTTTTTTGAGATCACATTGTTTTAATGTTTCACTATGTTTTTTTGTTTTTATTATAGAAATCTATTAAATGGTACAATTCGATTTGATCTGCCTCATCGATCTGAATCAGGTAAGTTATGAAGTTCTTATTATAATTTCGATATTAAAAACAAAAAAAAGTATGATTGAGATTAATTTATGTCGAATGTTTGAGTGACACCAAAGTAACTTTTAAGGCAATTCAGCTATTTATTACTGTCAAACAAAAAGGGTTTGTAAATTAATATTGACAGATTAGAATTGAAAAGTTTTAAGTAAGGGTTTTATATTCACAAACTTGGAGAACTATCACAATTAACCAGCTTTTAACTGAAGAGAAACTTAGGAAATGGATAGAACACACATTGAGGAAGTCGTCAAACTACATCATCATACAAGCGCTAACTTGGAATCCTGAAGAGAAACGGAAAGGAGGAAGGTCAAAGAAAACAGTGCATCGAACATTGGAAGCAAACTTCGAAAGAATAAATAGCAAGTGGAAACAAGTTGAAAAGATTGTCTAG]

[+] EMBL CD152492             [ACATTTAGATTTCATTATAAAAATGATTCATCCAATTTGTTTCGGGTTTCACTATTTTTTTTGAGATCACATTGTTTTAATGTTTCACTATGTTTTTTTGTTTTTATTATAGAAATCTATTAAATGGTACAATTCGATTTGATCTGCCTCATCGATCTGAATCAGGTAAGTTATGAAGTTCTTATTATAATTTCGAAATTAAAAACAAAAAAAAGTATGATTGAGATTAATTTATGTCGAATGTTTGAGTGACACCAAAGTAACTTTTAAGGCAATTCAGCTATTTATTACTGTCAAACA                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CD070024             [                                                                                                                                                                  CAGGTAAGTTATGAAGTTCTTATTATAATTTCGATATTAAAAACAAAAAAAAGTATGATTGAGATTAATTTATGTCGAATGTTTGAGTGACACCAAAGTAACTTTTAAGGCAATTCAGCTATTTATTACTGTCAAACAAAAAGGGTTTGTAAATTAATATTGACAGATTAGAATTGAAAAGTTTTAAGTAAGGGTTTTATATTCACAAACTTGGAGAACTATCACAATTAACCAGCTTTTAACTGAAGAGAAACTTAGGAAATGGATAGAACACACATTGAGGAAGTCGTCAAACTACATCATCATACAAGCGCTAACTTGGAATCCTGAAGAGAAACGGAAAGGAGGAAGGTCAAAGAAAACAGTGCATCGAACATTGGAAGCAAACTTCGAAAGAATAAATAGCAAGTGGAAACAAGTTGAAAAGATTGTCTAG]
[+] EMBL CD070017             [                                                                                                                                                                  CAGGTAAGTTATGAAGTTCTTATTATAATTTCGATATTAAAAACAAAAAAAAGTATGATTGAGATTAATTTATGTCGAATGTTTGAGTGACACCAAAGTAACTTTTAAGGCAATTCAGCTATTTATTACTGTCAAACAAAAAGGGTTTGTAAATTAATATTGACAGATTAGAATTGAAAAGTTTTAAGTAAGGGTTTTATATTCACAAACTTGGAGAACTATCACAATTAACCAGCTTTTAACTGAAGAGAAACTTAGGAAATGGATAGAACACACATTGAGGAAGTCGTCAAACTACATCATCATACAAGCGCTAACTTGGAATCCTGAAGAGAAACGGAAAGGAGGAAGGTCAAAGAAAACAGTGCATCGAACATTGGAAGCAAACTTCGAAAGAATAAATAGCAAGTGGAAACAAGTTGAAAAGATTGTCTAG]


>consensus_4889#0 ACATTTAGATTTCATTATAAAAATGATTCATCCAATTTGTTTCGGGTTTCACTATTTTTT TTGAGATCACATTGTTTTAATGTTTCACTATGTTTTTTTGTTTTTATTATAGAAATCTAT TAAATGGTACAATTCGATTTGATCTGCCTCATCGATCTGAATCAGGTAAGTTATGAAGTT CTTATTATAATTTCGATATTAAAAACAAAAAAAAGTATGATTGAGATTAATTTATGTCGA ATGTTTGAGTGACACCAAAGTAACTTTTAAGGCAATTCAGCTATTTATTACTGTCAAACA AAAAGGGTTTGTAAATTAATATTGACAGATTAGAATTGAAAAGTTTTAAGTAAGGGTTTT ATATTCACAAACTTGGAGAACTATCACAATTAACCAGCTTTTAACTGAAGAGAAACTTAG GAAATGGATAGAACACACATTGAGGAAGTCGTCAAACTACATCATCATACAAGCGCTAAC TTGGAATCCTGAAGAGAAACGGAAAGGAGGAAGGTCAAAGAAAACAGTGCATCGAACATT GGAAGCAAACTTCGAAAGAATAAATAGCAAGTGGAAACAAGTTGAAAAGATTGTCTAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)