Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 4896 cluster # 4896       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4896#0 length = 742 sequences # 3  

consensusID : consensus_4896#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 742
fasta sequence
                              [GAATATATCGACACCAATGTCACCCCCATACAGAACAGATACTATTGCTTATTATCTCAACTCTTCGATGAAAAAAGAACCATAATTCCATGATAGAGAATATAGTTTATGAATAAAGAAAAGGATCCAACGATTCCAAAACAAAACAGGAAATATACATAGTAATCAAATAAATTACAAGAAATAAATCTCTTGAAGATAATAAAATGGTATTTGAGGAAAGAGGAGGAAACTCGAGATAACCATTAGTTTGATGTGAATGCGCGTAAATATAATACAAAGATAGGACAAGATAAGACAGAGGAAACATACAATGGATAAGATTATGATTGATTCATATCAGCATTCGTAACTAAGGGACTGCTGTCTTCTACAGGTTTCGATGGGATAGTAATCACATTTCTCGAACGTATTGGTACACGATCAAGATGATTACGATTGAAATGAAATGCTGGAACTACCCATGTGCCGCATACACATGGTTCGCCACACCAATTGAAAGAGCCAACTTTAGCATTGCATCCAGGACAATAAAGCTTTCCTTGAACATCACTAGTGTTGTGCATTGTCCATTCCAATGGGTCACAGAACAATTCATTTTTATCACATTGTAGAGGAGAATTATTCAATGAAACACCTTTGATTAAGACACTAGATACATTATCAGTATTCTTGTATTTTGTAGAATTTATGAGAGGGTTAGGTGTTGTCTCCGGTTTTTGATGAATACGTAACTGATTCG]

[+] EMBL AI067624             [GAATATATCGACACCAATGTCACCCCCATACAGAACAGATACTATTGCTTATTATCTCAACTCTTCGATGAAAAAAGAACCATAATTCCATGATAGAGAATATAGTTTATGAATAAAGAAAAGGATCCAACGATTCCAAAACAAAACAGGAAATATACATAGTAATCAAATAAATTACAAGAAATAAATCTCTTGAAGATAATAAAATGGTATTTGAGGAAAGAGGAGGAAACTCGAGATAACCATTAGTTTGATGTGAATGCGCGTAAATATAATACAAAGATAGGACAAGATAAGACAGAGGAAACATACAATGGATAAGATTATGATTGATTCATATCAGCATTCGTAACTAAGGGACTGCTGTCTTCTACAGGTTTC                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CD141374             [                                                                                                                                                                                                                                           GAGATAACCATTAGTTTGATGTGAATGCGCGTAAATATAATACAAAGATAGGACAAGACAAGACAGAGGAAACATACAATGGATAAGATTATGATTGATTCATATCAGCATTCGTAACTAAGGGACTGCTGTCTTCTACAGGTTTCGATGGGATAGTAATCACATTTCTCGAACGTATTGGTACACGATCAAGATGATTACGATTGAAATGAAATGCTGGAACTACCCATGTGCCG                                                                                                                                                                                                                                                                               ]
[-] EMBL CD141328             [                                                                                                                                                                                                                                                                                                                                                                                                    TAGTAATCACATTTCTCGANCGTA TGGTACACGATCAAGATGATTACGATTGAAATGAAATGCTGGAACTACNCATGTGCCGCATACACATGGTTCGCCACACCAATTGAAAGAGCCAACTTTAGCATTGCATCCAGGACAATAAAGCTTTCCTTGAACATCACTAGTGTTGTGCATTGTCCATTCCAATGGGTCACAGAACAATTCATTTTTATCACATTGTAGAGGAGAATTATTCAATGAAACACCTTTGATTAAGACACTAGATACATTATCAGTATTCTTGTATTTTGTAGAATTTATGAGAGGGTTAGGTGTTGTCTCCGGTTTTTGATGAATACGTAACTGATTCG]


>consensus_4896#0 GAATATATCGACACCAATGTCACCCCCATACAGAACAGATACTATTGCTTATTATCTCAA CTCTTCGATGAAAAAAGAACCATAATTCCATGATAGAGAATATAGTTTATGAATAAAGAA AAGGATCCAACGATTCCAAAACAAAACAGGAAATATACATAGTAATCAAATAAATTACAA GAAATAAATCTCTTGAAGATAATAAAATGGTATTTGAGGAAAGAGGAGGAAACTCGAGAT AACCATTAGTTTGATGTGAATGCGCGTAAATATAATACAAAGATAGGACAAGATAAGACA GAGGAAACATACAATGGATAAGATTATGATTGATTCATATCAGCATTCGTAACTAAGGGA CTGCTGTCTTCTACAGGTTTCGATGGGATAGTAATCACATTTCTCGAACGTATTGGTACA CGATCAAGATGATTACGATTGAAATGAAATGCTGGAACTACCCATGTGCCGCATACACAT GGTTCGCCACACCAATTGAAAGAGCCAACTTTAGCATTGCATCCAGGACAATAAAGCTTT CCTTGAACATCACTAGTGTTGTGCATTGTCCATTCCAATGGGTCACAGAACAATTCATTT TTATCACATTGTAGAGGAGAATTATTCAATGAAACACCTTTGATTAAGACACTAGATACA TTATCAGTATTCTTGTATTTTGTAGAATTTATGAGAGGGTTAGGTGTTGTCTCCGGTTTT TGATGAATACGTAACTGATTCG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)