cluster # 5004

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Schistosoma mansoni
cluster # 5004 cluster # 5004 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5004#0 length = 456 sequences # 3

consensusID : consensus_5004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 456
fasta sequence

                              [TGGTGGTTCTGGAACGTTTGTCCATAG-TGTAAAAAGTAAATCAGCAGAACTAATAATGAAGGAGCACAGAACAGCATCAGAAACAACCATAACAATCTCCACCAGTATATCCAAAATATTAGAGAGAGGCTCAACCAAACACGCGACTATTGGAGCCACAACCCGAGCTCATACGCACAACTAGTTTAATGAGCAACACTTTGACTTCCAGGAGAACTAATACATCCTTAATCCCCGTTTGGAAATGCTTACGAAAGACCCTTTAAAATCCTTCATCATAAACCTAAGTACTATAGCATCGGTAAGAACGGAACTAACGATTACATCAGCACCAACCGTGTTGAAGCTAATCACCTAGAAGCAATCCCTACTTGTGTTGACCTTCCACATGAACAGTCGAATGATACAAGCCTCACGACTAACATGAAATGCTCCATAATTAACGAACTCGACTAA]

[+] EMBL CD160381             [TGGTGGTTCTGGAACGTTTGTCCATAG TGTAAAAAGTAAATCAGCAGAACTAATAATGAAGGAGCACAGAACAGCATCAGAAACAACCATAACAATCTCCACCAGTATATCCAAAATATTAGAGAGAGGCTCAACCAAACACGCGACTATTGGAGCCACAACCCGAGCTCATACGCACAACTAGTTTAATGAGCAACACTTTGACTTCCAGGAGAACTAATACATCCTTAATCCCCGTTTGGAAATGCTTACGAAAGACCCTTTAAAATCCTTCATCATAAACCTAAGTACTATAGCATCGGTAAGAACGGAACTAACGATTACATCAGCACCAACCGTGTTGAAGCTAATCACCTAGAAGCAATCCCTACTTGTGTTGACCTTCCACATGAACAGTCGAATGATACAAGCCTCACGACTAACATGAAATGCTCCATAATTAACGAACTCGACTAA]
[+] EMBL CD160315             [TGGTGGTTCTGGAACGTTTGTCCATAG TGTAAAAAGTAAATCAGCAGAACTAATAATGAAGGAGCACAGAACAGCATCAGAAACAACCATAACAATCTCCACCAGTATATCCAAAATATTAGAGAGAGGCTCAACCAAACACGCGACTATTGGAGCCACAACCCGAGCTCATACGCACAACTAGTTTAATGAGCAACACTTTGACTTCCAGGAGAACTAATACATCCTTAATCCCCGTTTGGAAATGCTTACGAAAGACCCTTTAAAATCCTTCATCATAAACCTAAGTACTATAGCATCGGTAAGAACGGAGCTAACGATTACATCAGCACCAACCGTGTTGAAGCTAATCACCTAGAAGCAATCCCTACTTGTGTTGACCTTCCACATGAACAGTCGAATGATACAAGCCTCACGACTAAAATGAAATGCTCCATAATTAACGAcc        ]
[+] EMBL CD160108             [cGGTGGTTCTGGAACGTTGGTCCATAGTTGT CTATGTTGATTAGCATAACTATTCATGAAGGAGCACAGAACAGCGTCATAAATGACCATAACCATCTCCACCAGTATATCCAAAATATTAGAGAGAGGCTCAACCAAACACGCGACTATTGGAGCCACAACCCGAGCTCATGCGCACAACTAGTTTAATGAGCAACACTTTGACTTCCAGGAGAACTAATACATCCTTAATCCCCGTTTGGAAATGCTTACGAAAGACCCTTTAAAATCCTTCATCATAAACCTAAGTACTATAGCATCGGTAAGAACGGAACTAACGATTACATCAGCACCAACCGTGTTGAAGCTAATCACCTAGAAGCAATCCCTACTTGTGTTGACCTTCCACATTAACAGTCGAATGATACAAG                                              ]




>consensus_5004#0
TGGTGGTTCTGGAACGTTTGTCCATAGTGTAAAAAGTAAATCAGCAGAACTAATAATGAA
GGAGCACAGAACAGCATCAGAAACAACCATAACAATCTCCACCAGTATATCCAAAATATT
AGAGAGAGGCTCAACCAAACACGCGACTATTGGAGCCACAACCCGAGCTCATACGCACAA
CTAGTTTAATGAGCAACACTTTGACTTCCAGGAGAACTAATACATCCTTAATCCCCGTTT
GGAAATGCTTACGAAAGACCCTTTAAAATCCTTCATCATAAACCTAAGTACTATAGCATC
GGTAAGAACGGAACTAACGATTACATCAGCACCAACCGTGTTGAAGCTAATCACCTAGAA
GCAATCCCTACTTGTGTTGACCTTCCACATGAACAGTCGAATGATACAAGCCTCACGACT
AACATGAAATGCTCCATAATTAACGAACTCGACTAA

clustalw multiple alignements is not computed in this case