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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5040 cluster # 5040       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5040#0 length = 1008 sequences # 3  

consensusID : consensus_5040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1008
fasta sequence
                              [GAGGCCTGNAATTCGGCACGAGGGCCTTATTCAAAAATTGTTTCAATTTAGCTAATGAGAAACGAGAACGTTTGGCAAATAAATTACGTACAGAGAATTGGCAAAAACAAGAATTACTCACATTATATCACACATCTGTACGGGAAATAACTGAACTCAATAAAACCCTCAAACAACGTGATTTACAGATCTTAGAACTTACGATGAAAATAGAACAACTTGAGTGTTTACCAAAAAGTACTAGTCGGTGTAATCCTGTCAGTCAGGCCGGATATA-TTGCAACAACAGCAGCATTGACAGAGCCATTAAGTGATTCGGTTGATGATCCTACAAAATTTTGTTTAGATGATAGACAGTTCCCATCTAATAAACAACGGGATGTGTCATCTCTACTGTCAACATACAATATAGGTCAATTGTTTACCAATACCTCGACAAATACACTTGGTAACATGCTTATCCACTCTGCCTCAGTAAAGCATGATAATAGTGGTAGTGATAATACCGTTTTACAGACTTCTAGATTGTGTGCATCAGCCATCCCATCCATAACTTCATTCACAGACTTTGCAAGTTATAATTACCCTGCAATTTATGCTCATACAACTAATCACTATAAAGACAAACAGAATCTAATCTTCACAGGACCTGTTACTTCTACTTTCCACACTAACTTATCTTCATCTTGTCTGTTAACTTCTCGAATATGTTCCTCCTTCTCGTCGTCATCATCGTCATCTTCAAATATGAGCTGCGCGGTGCATGCAGACGTACAGACACTTAATAATTATAAAGAATCATCTGTTATTACATCAATCAGTAGTAGCTGCCCAATTGTACATCAACGGCATCACCTAAAATAGCAGCAGTAACTATCTGCTGACATAGAGTAATCTATTACAATCATTGTCGTTAT-ATTATACACGAA-TAAT-GAGTG-TTTTCCTACCTTT-AATAAAGA-ACATGTACCTGTGAGAAATAGATAAC-TTTTTTATG-AAATAGCAGGGGTTC]

[+] EMBL CD081495             [GAGGCCTGNAATTCGGCACGAGGGCCTTATTCAAAAATTGTTTCAATTTAGCTAATGAGAAACGAGAACGTTTGGCAAATAAATTACGTACAGAGAATTGGCAAAAACAAGAATTACTCACATTATATCACACATCTGTACGGGAAATAACTGAACTCAATAAAACCCTCAAACAACGTGATTTACAGATCTTAGAACTTACGATGAAAATAGAACAACTTGAGTGTTTACCAAAAAGTACTAGTCGGTGTAATCCTGTCAGTCAGGCCGGATATA TTGCAACAACAGCAGCATTGACAGAGCCATTAAGTGATTCGGTTGATGATCCTACAAAATTTTGTTTAGATGATAGACAGTTCCCATCTAATAAACAACGGGATGTGTCATCTCTACTGTCAACATACAATATAGGTCAATTGTTTACCAATACCTCGACAAATACACTTGGTAACATGCTTATCCACTCTGCCTCAGTAAAGCATGATAATAGTGGTAGTGATAATACCGTTTTACAGACTTCTAGATTGTGTGCATCAGCCATCCCATCCATAACTTCATTCACAGACTTTGCAAGTTATAATTACCCTGCAATTTATGCTCATACAACTAATCACTATAAAGACAAACAGAATCTAATCTTCACAGGACCTGTTACTTCTACTTTCCACACTAACTTATCTTCATCTTGTCTGTTAACTTCTCGAATATGTTCCTCCTTCTCGTCGTCATCATCGTCATCTTCAAATATGAGCTGCGCGGTGCATGCAGACGTACAGACACTTAATAATTATAAAGAATCATCTGTTATTACATCAATCAGTAGTAGCTGCCCAATTGTACATCAACGGCATCACCTAAAATAGCAGCAGTAACTATCTGCTGACATAGAGTAATCTATTACAATCATTGTCCGTAT ATTATACACGAA TAAT GAGTG TTTTCCTACCTTT AATAAAGA ACATGTACCTGTGA AAATAGATAAC TTTTTTATG AAATAGCAGGGG   ]
[+] EMBL CD079878             [                                                                                                                                                                                                                                tcTTTACCAAAAAGTACTACTCGGTGTAATCCTGTCAGTCAGGCCGGATATACTTGCAACAACAGCAGCATTGACAGAGCCATTAAGTGATTCGGTTGATGATCCTACAAAATTTTGTTTAGATGATAGACAGTTCCCATCTAATAAACAACGGGATGTGTCATCTCTACTGTCAACATACAATATAGGTCATTTGTTCACCAATACCTCGACAAATACACTTGGTAACATGCTTATCCACTCTGCCTCAGTAAAGCATGATAATAGTGGTAGTGATAATACCGTTTTACAGACTTCTAGATTGTGTGCATCAGCCATCCCATCCATAACTTCATTCACAGACTTTGCAAGTTATAATTACCCTGCAATTTATGCTCATACAACTAATCACTATAAAGACAAACAGAATCTAATCTTCACAGGACCTGTTACTTCTACTTTCCACACTAACTTATCTTCATCTTGTCTGTTAACTTCTCGAATATGTTCCTCCCGCTCGTCGTCATCATCGTCATCTTCAAATATGAGCTGCGCGGTGCATGCAGACGTCCAGACCCTTAATAATTTTAAAGAATCATCTGTTATTACATCAATCAGTAGTAGCTGCCC TTTGTTCCTCACCCGCATC CCTAAAATAGCAGCCGTAACTTTTTGCTGACCTAAAGAAATCTTTTTCCAACATTGGCGTTTT AATTTTCCCGAT TTATGGGGCG TTTCCCCCCCTTT AA AAAGA ACCTGTCCCTG GAGAAATA AAAAC TTTTTTTTG AAATAACAGGt    ]
[-] EMBL CD075319             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGCCTCAGTAAAGCATGATAATAGTGGTAGTGATAATACCGTTTTACAGACTTCTAGATTGTGTGCATCAGCCATCCCATCCATAACTTCATTCACAGACTTTGCAAGTTATAATTACCCTGCAATTTATGCTCATACAACTAATCACTATAAAGACAAACAGAATCTAATCTTCACAGGACCTGTTACTTCTACTTTCCACACTAACTTATCTTCATCTTGTCTGTTAACTTCTCGAATATGTTCCTCCTTCTCGTCGTCATCATCGTCATCTTCAAATATGAGCTGCGCGGTGCATGCAGACGTACAGACACTTAATAATTATAAAGAATCATCTGTTATTACATCAATCAGTAGTAGCTGCCCAATTGTACATCAACGGCATCACCTAAAATAGCAGCAGTAACTATCTGCTGACATAGAGTAATCTATTACAATCATTGTCGTTATAATTATACACGAATTAAT GAGTGTTTTTCCTACCTTTAAATAAAGATACATGTACCTGTGAGATATAGATAACTTTTTTTATGAAAATAGCAAGGTTTC]


>consensus_5040#0 GAGGCCTGNAATTCGGCACGAGGGCCTTATTCAAAAATTGTTTCAATTTAGCTAATGAGA AACGAGAACGTTTGGCAAATAAATTACGTACAGAGAATTGGCAAAAACAAGAATTACTCA CATTATATCACACATCTGTACGGGAAATAACTGAACTCAATAAAACCCTCAAACAACGTG ATTTACAGATCTTAGAACTTACGATGAAAATAGAACAACTTGAGTGTTTACCAAAAAGTA CTAGTCGGTGTAATCCTGTCAGTCAGGCCGGATATATTGCAACAACAGCAGCATTGACAG AGCCATTAAGTGATTCGGTTGATGATCCTACAAAATTTTGTTTAGATGATAGACAGTTCC CATCTAATAAACAACGGGATGTGTCATCTCTACTGTCAACATACAATATAGGTCAATTGT TTACCAATACCTCGACAAATACACTTGGTAACATGCTTATCCACTCTGCCTCAGTAAAGC ATGATAATAGTGGTAGTGATAATACCGTTTTACAGACTTCTAGATTGTGTGCATCAGCCA TCCCATCCATAACTTCATTCACAGACTTTGCAAGTTATAATTACCCTGCAATTTATGCTC ATACAACTAATCACTATAAAGACAAACAGAATCTAATCTTCACAGGACCTGTTACTTCTA CTTTCCACACTAACTTATCTTCATCTTGTCTGTTAACTTCTCGAATATGTTCCTCCTTCT CGTCGTCATCATCGTCATCTTCAAATATGAGCTGCGCGGTGCATGCAGACGTACAGACAC TTAATAATTATAAAGAATCATCTGTTATTACATCAATCAGTAGTAGCTGCCCAATTGTAC ATCAACGGCATCACCTAAAATAGCAGCAGTAACTATCTGCTGACATAGAGTAATCTATTA CAATCATTGTCGTTATATTATACACGAATAATGAGTGTTTTCCTACCTTTAATAAAGAAC ATGTACCTGTGAGAAATAGATAACTTTTTTATGAAATAGCAGGGGTTC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)