Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5045 cluster # 5045       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5045#0 length = 557 sequences # 3  

consensusID : consensus_5045#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 557
fasta sequence
                              [AAATCATGAG-AAACATCATTCAC-GTTATCATCAGAATCAGATTTAAGAACTTCCGATAATGTAGTTATTGAACCTTCATCATTGGGGAATAGTGGGGAACTTGGGAACACAGAGAAATGCTGTTGTCTTTGATGATGTTGGTG-AG-AACAATAATGATTGAA-ACTGTTTAAATCTG-ACG-ACATAGAG-ACAATGG-ACGCATATTGTTG-ATGATGGTTTAGTAACGT-AG-ATTCAGAGG-AGTTGTCGAACGATGAGGT-ATGATT-AGGAATCAAATCTACTGCCGTTGGTGCTGCCGCCGCAGCTGTCACTAGTGTTGCCTCTGAATGAATATTATTTGAATTGGGTGATTTTTCATAAGTGCCTGAAAGACCATCCCCTCCAACTGCTAAATTAGGTTGAATATTAATTAGTGATACATGATAATTGTCACATGCTGACGACTGAGACAATGTAGTAGTAGTAGTGTAATCTGTTAAACAGTGAGTTGTTTGTCCATAAGAAAGGTTTGATGATAATGAATGTGGTGATGTGTCAACACAATTGTCTATTAATGACTGTAC]

[+] EMBL CD060349             [AAATCATGAGCAAACATCATTCACGGTTATCATCAGAATCAGATTTAAGAACTTCCGATAATGTAGTTATTGCACCTTCATCATTGGGGAATAGTGGGGAACTTGGGAACACAGAGACATGCTGTTGTCTTTGATGATGTTGGTGCAGCAACAATAATGATTGAACACTGTTTAAATCTGCACGCACATAGAGCACAATGGCACGCATATTGTTGCATGATGGTTTAGTAACGTCAGCATTCAGAGGCAGTTGTCGAACGATGAGGTCATGATTCAGGAATCAAATCTACTGCCGTTGGTGCTGCCAGCGCAGCTGTCACTAGTGTTGCCTCTGAATGAATATTATTTGAATTGGGTGATTTTTCATAAGTGCCTGAAAGACCATCCCCTCCAACTGCTAAATTAGGTTGAATATTAATTAGTGATACATGATAATTGTCAC                                                                                                                                  ]
[+] EMBL CD060315             [ AATCATTTG AAACATCATTCAC GTTATCATCAGAATCAGATTTAAGAACTTCCGATAATGTAGTTATTGAACCTTCATCATTGGGGAATAGTGGGGAACTTGGGAACACAGAGAAATGCTGTTGTCTTTGATGATGTTGGTG AG AACAATAATGATTGAA ACTGTTTAAATCTG ACG ACATAGAG ACAATGG ACGCATATTGTTG ATGATGGTTTAGTAACGT AG ATTCAGAGG AGTTGTCGAACGATGAGGT ATGATT AGGAATCAAATCTACTGCCGTTGGTGCTGCCGCCGCAGCTGTCACTAGTGTTGCCTCTGAATGAATATTATTTGAATTGGGTGATTTTTCATAAGTGCCTGAAAGACCATCCCCTCCAACTGCTAAATTAGGTTGAATATTAATTAGTGATACATGATAATTGTCACATGCTGACGACTGAGACAATGT                                                                                                            ]
[+] EMBL CD064936             [                      AC GTTATCATCAGAATCAGATTTAAGAACTTCAGATAATGTAGTTATTGAACCTTCATCATTGGGGAATAGTGGGGAACTTGGGAACACAGAGAAATGCTGTTGTCTTTGATGATGTTGGTG AG AACAATAATGATTGAA ACTGTTTAAATCTG ACG ACATAGAG ACAATGG ACGCATATTGTTG ATGATGGTTTAGTAACGT AG ATTCAGAGG AGTTGTCGAACGATGAGGT ATGATT AGGAATCAAATCTACTGCCGTTGGTGCTGCCGCCGCAGCTGTCACTAGTGTTGCCTCTGAATGAATATTATTTGAATTGGGTGATTTTTCATAAGTGCCTGAAAGACCATCCCCTCCAACTGCTAAATTAGGTTGAATATTAATTAGTGATACATGATAATTGTCACATGCTGACGACTGAGACAATGTAGTAGTAGTAGTGTAATCTGTTAAACAGTGAGTTGTTTGTCCATAAGAAAGGTTTGATGATAATGAATGTGGTGATGTGTCAACACAATTGTCTATTAATGACTGTAC]


>consensus_5045#0 AAATCATGAGAAACATCATTCACGTTATCATCAGAATCAGATTTAAGAACTTCCGATAAT GTAGTTATTGAACCTTCATCATTGGGGAATAGTGGGGAACTTGGGAACACAGAGAAATGC TGTTGTCTTTGATGATGTTGGTGAGAACAATAATGATTGAAACTGTTTAAATCTGACGAC ATAGAGACAATGGACGCATATTGTTGATGATGGTTTAGTAACGTAGATTCAGAGGAGTTG TCGAACGATGAGGTATGATTAGGAATCAAATCTACTGCCGTTGGTGCTGCCGCCGCAGCT GTCACTAGTGTTGCCTCTGAATGAATATTATTTGAATTGGGTGATTTTTCATAAGTGCCT GAAAGACCATCCCCTCCAACTGCTAAATTAGGTTGAATATTAATTAGTGATACATGATAA TTGTCACATGCTGACGACTGAGACAATGTAGTAGTAGTAGTGTAATCTGTTAAACAGTGA GTTGTTTGTCCATAAGAAAGGTTTGATGATAATGAATGTGGTGATGTGTCAACACAATTG TCTATTAATGACTGTAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)