cluster # 5076

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Schistosoma mansoni
cluster # 5076 cluster # 5076 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5076#0 length = 640 sequences # 3

consensusID : consensus_5076#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 640
fasta sequence

                              [AAGTATTTCGAAATGCATCAAGATCGTCCTCACTCTGGATTGTCTTAGGACATCGTCGTATGCGATCTCATCCTGAGTTTTTACGTCAACATTTTAGTGGAAACGAAAAAAGTTCCGTTGTATCTATAGAATCAGATGAACCTAAGGCTCCAGATAGTAAAAATCTAGCTTTACATCCCAGTCAAACATCATCTGACAAATTTGCTCATCGGTTCACTGAACGTCGAGATCAGAATCCACTCACTCTACACCATCGACCTTATGAAACTCATAGACGATTATTTTCAGCATCTGGAGCTATCTTCCCCACCAAAGATCG-TCCTAGTAGTCCTGAAAAGAGCACGGTTGTCAAAAGTACGGTCCGAAGCCATAGGAGAACACCGAAATCGTCATTATCTAAACCAAGTCCTCCTAAGGCTCATGGAACTTCCCATGTTGAATACCCTATTATTGCAAATAAGATAACAGAGGGAAATAATAGTAGGGAGGGTAATTCTGAGAAAGTTTTTACAGTGACGGATAGCAGTGAAATCGTCGAGTCTCGTTTTACTGGAACTCATCCTCATAACATAATCACTAAAG-CCCACAGTCTGAGTCTCAACATACTAACGGTCAAAAGAATTTCAGTTATTCATATTTC]

[+] EMBL CD060530             [AAGTATTTCGAAATGCATCAAGATCGTCCTCACTCTGGATTGTCTTAGGACATCGTCGTATGCGATCTCATCCTGAGTTTTTACGTCAACATTTTAGTGGAAACGAAAAAAGTTCCGTTGTATCTATAGAATCAGATGAACCTAAGGCTCCAGATAGTAAAAATCTAGCTTTACATCCCAGTCAAACATCATCTGACAAATTTGCTCATCGGTTCACTGAACGTCGAGATCAGAATCCACTCACTCTACACCATCGACCTTATGAAACTCATAGACGATTATTTTCAGCATCTGGAGCTATCTTCCCCACCAAAGATCGATCCTAGTAGTCCTGAAAAGAGCGCGGTTGTCAAAAGTACGGTCCGAAGCCATAGGAGAACACCGAAATCGCCATTATCTAAACCAAGTCCTCCTAAGGCTCATGGAACTTCCCATGTTGAATACCCTATTATTGCCAATAAGATAACAGAGGGAAATAATAGTAGGGAGGGTAATTC                                                                                                                                                 ]
[-] EMBL CD161511             [                                                                                                                                                                                                         TTGCTCATCGGTTCACTGAACGTCGAGATCAGAATCCACTCACTCTACACCATCGACCTTATGAAACTCATAGACGATTATTTTCAGCATCTGGAGCTATCTTCCCCACCAAAGATCG TCCTAGTAGTCCTGAAAAGAGCACGGTCGTCAAAAGTACGGTCCGAAGCCATAGGAGAACACCGAAATCGTCATTATCTAAACCAAGTCATCCTAAGGCTCATGGAACTTCCCATGTTGAATACTCTATTATTGCAAATAAGATAACAGAGGGAAATAATAGTAGGGAGGGTAATTCTGAGAAAGTTTTTACAGTGACGGATAGCAGTGAAATCGTCGAGTCTCGTTTTACTGGAACTCATCCTCATAACATAATCACTAAAGCCCCACAGTCTGAGTCTCAACATACTAACGGTCAAAAGAATTTCAGTTATTC       ]
[+] EMBL CD190586             [                                                                                                                                                                                                                                                                                                                         AGATCG TCCTAGTAGTCCTGAAAAGAGCACGGTTGTCAAAAGTACGGTCCGAAGCCATAGGAGAACACCGAAATCGTCATTATCTAAACCAAGTCCTCCTAAGGCTCATGGAACTTCCCATGTTGAATACCCTATTATTGCAAATAAGATAACAGAGGGAAATAATAGTAGGGAGGGTAATTCTGAGAAAGTTTTTACAGTGACGGATAGCAGTGAAATCGTCGAGTCTCGTTTTACTGGAACTCATCCTCATAACATAATCACTAAAG CCCACAGTCTGAGTCTCAACATACTAACGGTCAAAAGAATTTCAGTTATTCATATTTC]




>consensus_5076#0
AAGTATTTCGAAATGCATCAAGATCGTCCTCACTCTGGATTGTCTTAGGACATCGTCGTA
TGCGATCTCATCCTGAGTTTTTACGTCAACATTTTAGTGGAAACGAAAAAAGTTCCGTTG
TATCTATAGAATCAGATGAACCTAAGGCTCCAGATAGTAAAAATCTAGCTTTACATCCCA
GTCAAACATCATCTGACAAATTTGCTCATCGGTTCACTGAACGTCGAGATCAGAATCCAC
TCACTCTACACCATCGACCTTATGAAACTCATAGACGATTATTTTCAGCATCTGGAGCTA
TCTTCCCCACCAAAGATCGTCCTAGTAGTCCTGAAAAGAGCACGGTTGTCAAAAGTACGG
TCCGAAGCCATAGGAGAACACCGAAATCGTCATTATCTAAACCAAGTCCTCCTAAGGCTC
ATGGAACTTCCCATGTTGAATACCCTATTATTGCAAATAAGATAACAGAGGGAAATAATA
GTAGGGAGGGTAATTCTGAGAAAGTTTTTACAGTGACGGATAGCAGTGAAATCGTCGAGT
CTCGTTTTACTGGAACTCATCCTCATAACATAATCACTAAAGCCCACAGTCTGAGTCTCA
ACATACTAACGGTCAAAAGAATTTCAGTTATTCATATTTC

clustalw multiple alignements is not computed in this case