cluster # 5123

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Schistosoma mansoni
cluster # 5123 cluster # 5123 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5123#0 length = 632 sequences # 3

consensusID : consensus_5123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 632
fasta sequence

                              [GCTCAAAAGCAACAACTGAGAAAGAAGAATAAAAGGCATAAAATCACACTGAACTCAAGATTTAGTAGAAAACAGAGAATACTCCAACCTCATCAAAACAACCAATTTCGCGCATCTGCAACAGTAGACAGCGATCGACACCCAATGACTTCATGGATTAATTTAATGTTTTGACTTTACATAACTTTTTTCTGACCTATTTTATACTAGCTACCATTGTGCGTAAAAGTGGGAGGTGGCTGGACAGGCATCACAGATTTAGGTAGATGATTATTGATAGAACAATTATCAGTAAGAAATTTGTCTCTAAGATAGACGTTAAGCAACATATTTTCGGGAGATTAGTCAATAGGGTGGTAGGACTACCATACCAACACATAAGATGTTTCGAACACAGTGACACGGTTTACCTCCCTATCCCGACTATCAAAAGAAACAACTAATTACATTGTGACCTTCATTTTCATTCTTGATCATCCATTTATTATTCGATAAAAGGCTGAGTCATACTATCTTAATCGAGTACATTATTTGTATTAGTTGATCAGTGGTTCGACTTCACTTTAGAAACTCAGCTATGATTTACGGAAGAGTAAATAATTAGTTATGATACTCTAGTTATTTCCTTGTTT]

[+] EMBL CD090223             [GCTCAAAAGCAACAACTGAGAAAGAAGAATAAAAGGCATAAAATCACACTGAACTCAAGATTTAGTAGAAAACAGAGAATACTCCAACCTCATCAAAACAACCAATTTCGCGCATCTGCAACAGTAGACAGCGATCGACACCCAATGACTTCATGGATTAATTTAATGTTTTGACTTTACATAACTTTTTTCTGACCTATTTTATACTAGCTACCATTGTGCGTAAAAGTGGGAGGTGGCTGGACAGGCATCACAGATTTAGGTAGATGATTATTGATAGAACAATTATCAGTAAGAAATTTGTCTCTAAGATAGACGTTAAGCAACATATTTTCGGGAGATTAGTCAATAGGGTGGTAGGACTACCATACCAACACATAAGATGTTTCGAACACAGTGACACGGTTTACCTCCCTATCCCGACTATCAAAAGAAACAACTAATTACATTGTGACCTTCATTTTCATTCTTGATCATCCATTTATTATTCGATAAAAGGCTGAGTCATACTATTTTAATCGAGTACATTATTTGTATTA                                                                                             ]
[-] EMBL CD177723             [                                                                                                                                                                                                                                                                                                                                           TTTCGGGAGATTAGTCAATAGGGTGGTAGGACTACCATACCAACACATAAGATGTTTCGAACACAGTGACACGATTTACCTCCCTATCCCGACTATCAAAAGAAACAACTAATTACATTGTGACCTTCATTTTCATTTTTGATCATCCATTTATTATTCGATAAAAGGCTGAGTCATACTATCTTAATCGAGTACATTATTTGTATTAGTTGATCAGTGGTTCGACTTCACTTTAGAAACTCAGCTATGATTTACGGAAGAGTAAATAATTAGTTATGATACTCTAGTTATTTCCTTGTTT]
[-] EMBL CD171502             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCCATTTATTATTCGATAAAAGGCTGAGTCATACTTTCTTAATCGAGTACATTATTTGTATTAGTTGATCAGTGGTTCGACTTCACTTTAGAAACTCAGCTATGATTTACGGAAGAGTAAATAATTAGTTATGATACTCTAGTTATTTCCTTGTTT]




>consensus_5123#0
GCTCAAAAGCAACAACTGAGAAAGAAGAATAAAAGGCATAAAATCACACTGAACTCAAGA
TTTAGTAGAAAACAGAGAATACTCCAACCTCATCAAAACAACCAATTTCGCGCATCTGCA
ACAGTAGACAGCGATCGACACCCAATGACTTCATGGATTAATTTAATGTTTTGACTTTAC
ATAACTTTTTTCTGACCTATTTTATACTAGCTACCATTGTGCGTAAAAGTGGGAGGTGGC
TGGACAGGCATCACAGATTTAGGTAGATGATTATTGATAGAACAATTATCAGTAAGAAAT
TTGTCTCTAAGATAGACGTTAAGCAACATATTTTCGGGAGATTAGTCAATAGGGTGGTAG
GACTACCATACCAACACATAAGATGTTTCGAACACAGTGACACGGTTTACCTCCCTATCC
CGACTATCAAAAGAAACAACTAATTACATTGTGACCTTCATTTTCATTCTTGATCATCCA
TTTATTATTCGATAAAAGGCTGAGTCATACTATCTTAATCGAGTACATTATTTGTATTAG
TTGATCAGTGGTTCGACTTCACTTTAGAAACTCAGCTATGATTTACGGAAGAGTAAATAA
TTAGTTATGATACTCTAGTTATTTCCTTGTTT

clustalw multiple alignements is not computed in this case