cluster # 5168

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Schistosoma mansoni
cluster # 5168 cluster # 5168 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5168#0 length = 521 sequences # 3

consensusID : consensus_5168#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 521
fasta sequence

                              [AGCTATGGAAAGCAAGTTACTTCGTGGTGATCAATCAATTGTTGAACACACTCGCATGCAAGAAGTAACTTTAGCTCAACAACGGACACAAATGGCTGAGCAAAAACGTCGTGAGCTTGAAATAGTAGCTCGTATGGAGGAAGAAGAAGGGAGTATGGCTAATTTACAAGAAGGTTTTACATCATTAAAACAAGAAGTAGAAGTAAACACTAGAAAGTTAAAAAAATTATTTGAAAAATTACAAGAAATTAAACAGAAGACATCTGATATGCAAGAAAAACATACTGTAGAACGTCNAGAACACGAAAAAATTCAAGATCNATTAACACGTGAAATTAAATTGCAGCTATTAATTCTGGAAAAC-TCATACCANNTCG-AG--AAAGAG-AATTAGAGAAACGAATTTATTTTGATGAAGAAACCGAAAGATGGCAACTGAAACCTTTTCTTCAATCTAGTAGTGATGATATAAACATAAATATTCCATTCAATAAACGATCTGTTTGTCGTTATGCACGTATGGT]

[-] EMBL CD190416             [AGCTATGGAAAGCAAGTTACTTCGTGGTGATCAATCAATTGTTGAACACACTCGCATGCAAGAAGTAACTTTAGCTCAACAACGGACACAAATGGCTGAGCAAAAACGTCGTGAGCTTGAAATAGTAGCTCGTATGGAGGAAGAAGAAGGGAGTATGGCTAATTTACAAGAAGGTTTTACATCATTAAAACAAGAAGTAGAAGTAAACACTAGAAAGTTAAAAAAATTATTTGAAAAATTACAAGAAATTAAACAGAAGACATCTGATATGCAAGAAAAACATACTG                                                                                                                                                                                                                                               ]
[+] EMBL CD139641             [   TATGGAAAGCAAGTTACTTCGTGGTGATCAATCAATTGTTGAACACACTCGCATGCAAGAAGTAACTTTAGCTCAACAACGGACACAAATGGCTGAGCAAAAACGTCGTGAGCTTGAAATAGTAGCTCGTATGGAGGAAGAAGAAGGGAGTATGGCTAATTTACAAGAAGGTTTTACATCATTAAAACAAGAAGTAGAAGTAAACACTAGAAAGTTAAAAAAATTATTTGAAAAATTACAAGAAATTAAACAGAAGACATCTGATATGCAAGANAAACATACTGTAGAACGTCNAGAACACGAAAAAATTCAAGATCNATTAACACGTGAAATTAAATTGCAGCTATTAATTCTGGAAAAC TCATACCANNTCG AG  AAAGAG AATTAGAGA                                                                                                                               ]
[+] EMBL CD140937             [                                        GTTGAACACACTCGCATGCAAGAAGTAACTTTAGCTCAACAACGGACACAAATGGCTGAGCAAAAACGTCGTGAGCTTGAAATAGTAGCTCGTATGGAGGAAGAAGAAGGGAGTATGGCTAATTTACAAGAAGGTTTTACATCATTAAAACAAGAAGTAGAAGTAAACACTAGAAAGTTAAAAAAATTATTTGAAAAATTACAAGAAATTAAACAGAAGACATCTGATATGCAGGAAAAACATACTGTAGAACGTCAAGAACACGAAAAAATTCAAGATCAATTAACACGTGAAATTAAATTGCAGCTATTAATTCTGGAAAACTTCATACCA ATCGAAGAAAAAGAGAAATTAGAGAAACGAATTTATTTTGATGAAGAAACCGAAAGATGGCAACTGAAACCTTTTCTTCAATCTAGTAGTGATGATATAAACATAAATATTCCATTCAATAAACGATCTGTTTGTCGTTATGCACGTATGGT]




>consensus_5168#0
AGCTATGGAAAGCAAGTTACTTCGTGGTGATCAATCAATTGTTGAACACACTCGCATGCA
AGAAGTAACTTTAGCTCAACAACGGACACAAATGGCTGAGCAAAAACGTCGTGAGCTTGA
AATAGTAGCTCGTATGGAGGAAGAAGAAGGGAGTATGGCTAATTTACAAGAAGGTTTTAC
ATCATTAAAACAAGAAGTAGAAGTAAACACTAGAAAGTTAAAAAAATTATTTGAAAAATT
ACAAGAAATTAAACAGAAGACATCTGATATGCAAGAAAAACATACTGTAGAACGTCNAGA
ACACGAAAAAATTCAAGATCNATTAACACGTGAAATTAAATTGCAGCTATTAATTCTGGA
AAACTCATACCANNTCGAGAAAGAGAATTAGAGAAACGAATTTATTTTGATGAAGAAACC
GAAAGATGGCAACTGAAACCTTTTCTTCAATCTAGTAGTGATGATATAAACATAAATATT
CCATTCAATAAACGATCTGTTTGTCGTTATGCACGTATGGT

clustalw multiple alignements is not computed in this case