cluster # 5230

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Schistosoma mansoni
cluster # 5230 cluster # 5230 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5230#0 length = 623 sequences # 3

consensusID : consensus_5230#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 623
fasta sequence

                              [CAATGGCATCCAGACAAAAACACAACAGAGGATACAACTGTGATATTTCAAGAAATTCAGGAGGCTTACAAAGTTTTATCTGATCCCCAAGAACGTGCTTGGTATGATAAACATCGAGCTCAAATTTTACAGGGAAATGGTCGTGGTACTCAAATGGGTGAGACATCAGACTATCAGGAGAGTCGAGTCGATGTCTTCCAATACTTTACAAGATCTTGTTTTGAAAAATTCGATGATGACTTAAAGGGCTTTTATACTGTATACGCTAAAGTATTTGCCGATATAACTGAAGAGGAGAAATGTGCAGCTAAGTTTTCTGGTTGTCCCATGTCATCTAGTGAAAGTGATAGTGATGATGATGAAGATAACTGTAAGAAATATTCTGGACGTAAATCACGAAGTTATCCACCTTTTGGTTGTTCATCCAGTTCATACAAGGAAGTTGTTGCTCCATTCTATTTATTCTGGGAAATATTTGAAAC-AAAAAAACATATACATGGGTTGAAAAATATGATACACGACTTGCAGATTCACGTCAAGAACGTCGTGCGATGGAAGCAGAAAATAATCGTATGAGAATGTCTGCAATACGCAAGCGAAATGAAGAAATACGTCAATTAGTA]

[+] EMBL CD185226             [CAATGGCATCCAGACAAAAACACAACAGAGGATACAACTGTGATATTTCAAGAAATTCAGGAGGCTTACAAAGTTTTATCTGATCCCCAAGAACGTGCTTGGTATGATAAACATCGAGCTCAAATTTTACAGGGAAATGGTCGTGGTACTCAAATGGGTGAGACATCAGACTATCAGGAGAGTCGAGTCGATGTCTTCCAATACTTTACAAGATCTTGTTTTGAAAAATTCGATGATGACTTAAAGGGCTTTTATACTGTATACGCTAAAGTATTTGCCGATATAACTGAAGAGGAGAAATGTGCAGCTAAGTTTTCTGGTTGTCCCATGTCATCTAGTGAAAGTGATAGTGATGATGATGAAGATAACTGTAAGAAATATTCTGGACGTAAATCACGAAGTTATCCACCTCTTGGTTGTTCATCCAGTTCATACAAGGAAGTTGTTGCTCCATTCTATTTATTCTGGGAAATATTTGAAAC NAAAAAACATATACATGGGTTG AAAATATGATACACG                                                                                                       ]
[+] EMBL CD190623             [                                                                                                                  CGAGCTCAAATTTTACAGGGAAATGGTCGTGGTACTCAAATGGGTGAGACATCAGACTATCAGGAGAGTCGAGTCGATGTCTTCCAATACTTTACAAGATCTTGTTTTGAAAAATTCGATGATGACTTAAAGGGC TTTATACTGTATACGCTAAAGTATTTGCCGATATAACTGAAGAGGAGAAATGTGCAGCTAAGTTTTCTGGTTGTCCCATGTCATCTAGTGAAAGTGATAGTGATGATGATGAAGATAACTGTAAGAAATATTCTGGACGTAAATCACGAAGTTATCCACCTTTTGGTTGTTCATCCAGTTCATACAAGGAAGTTGTTGCTCCATTCTATTTATTCTGGGAAATATTTGAAAC AAAAAAACATATACATGGGTTGAAAAATATGATACACGACTTGCAGATTCACGTCAAGAACGTCGTGCGATGGAAGCAGAAAATAATCGTATGAGAATGTCTGCAATACGC                              ]
[-] EMBL CD185549             [                                                                                                                                                                                                                                                                                                          AATGTGCAGCTAAGTTTTCTGGTTGTCCCATGTCATCTAGTGAAAGTGATAGTGATGATGATGAAGATAACTGTAAGAAATATTCTGGACGTAAATCACGAAGTTATCCACCTTTTGGTTGTTCATCCAGTTCATACAAGGAAGTTGTTGCTCCATTCTATTTATTCTGGGAAATATTTGAAACAAAAAAAACATATACATGGGTTGAAAAATATGATACACGACTTGCAGATTCACGTCAAGAACGTCGTGCGATGGAAGCAAAAAATAATCGTATGAGAATGTCTGCAATACGCAAGCGAAATGAAGAAATACGTCAATTAGTA]




>consensus_5230#0
CAATGGCATCCAGACAAAAACACAACAGAGGATACAACTGTGATATTTCAAGAAATTCAG
GAGGCTTACAAAGTTTTATCTGATCCCCAAGAACGTGCTTGGTATGATAAACATCGAGCT
CAAATTTTACAGGGAAATGGTCGTGGTACTCAAATGGGTGAGACATCAGACTATCAGGAG
AGTCGAGTCGATGTCTTCCAATACTTTACAAGATCTTGTTTTGAAAAATTCGATGATGAC
TTAAAGGGCTTTTATACTGTATACGCTAAAGTATTTGCCGATATAACTGAAGAGGAGAAA
TGTGCAGCTAAGTTTTCTGGTTGTCCCATGTCATCTAGTGAAAGTGATAGTGATGATGAT
GAAGATAACTGTAAGAAATATTCTGGACGTAAATCACGAAGTTATCCACCTTTTGGTTGT
TCATCCAGTTCATACAAGGAAGTTGTTGCTCCATTCTATTTATTCTGGGAAATATTTGAA
ACAAAAAAACATATACATGGGTTGAAAAATATGATACACGACTTGCAGATTCACGTCAAG
AACGTCGTGCGATGGAAGCAGAAAATAATCGTATGAGAATGTCTGCAATACGCAAGCGAA
ATGAAGAAATACGTCAATTAGTA

clustalw multiple alignements is not computed in this case