cluster # 5407

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Schistosoma mansoni
cluster # 5407 cluster # 5407 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5407#0 length = 434 sequences # 3

consensusID : consensus_5407#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 434
fasta sequence

                              [GTGAAATCGATTCCCATAACCGTGTGGTCGTGTACTTAACAAGGGATTCCTGGATAAACTAGTTACTTTCCGAGGAACAGTTTTGTTAATTCCCAGATTCCATTCTTCATCAGAATTATGACTTTCCGCACTAGGGTAGCCATAACCGGGACTTGACTTTCTTATTCGCTTTTGTTCTCCCGAATGATAGTTGACCACATTACTGTTGCCACG-CGAGTTGTATCTCCGTTTGATACCAAGTCGTAAAGAAGTATCATGCTCAGTATCCCGCACATGCCGTCTTATATCTGTTTT-CCCATACCTGCCGAGTCATTGTAGCATTTTCTGAGCTGCAATTTATGGCGTGCATCTGAAGGGAGTAGAGGAACGTGTGAACTTGATGAGTAAGGCATGTGACAGGATTTCGGGACTACTCATGAGATTCGAAAGCACCG]

[+] EMBL CD112341             [GTGAAATCGATTCCCATAACCGTGTGGTCGTGTACTTAACAAGGGATTCCTGGATAAACTAGTTACTTTCCGAGGAACAGTTTTGTTAATTCCCAGATTCCATTCTTCATCAGAATTATGACTTTCCGCACTAGGGTAGCCATAACCGGGACTTGACTTTCTTATTCGCTTTTGTTCTCCCGAATGATAGTTGACCACATTACTGTTGCCACG CGAGTTGTATCTCCGTTTGATACCAAGTCGTAAAGAAGTATCATGCTCAGTATCCCGCACATGCCGTCTTAT                                                                                                                                                      ]
[+] EMBL CD183489             [                                                              TTACTTTCCGAGGAACAGTTTTGTTAATTCCCAGATTCCATTCTTCATCAGAATTATAACTTTCCGCACTAGGGTAGCCATAACCGGGACTTGACTTTCTTATTCGCTTTTGTTCTCCCGAATGATAGTTGACCACATTACTGTCGCC CGTCGAGCAGTATCTCCGTTTGATACCAAGTCGTAAAGAAGTATCATGCTCAGTATCCCGCACATGCCGTCTTATATCTGTTTT CCCATACCTGCCGAGTCATTGTAGCATTTTCTGAGCTGCAATTTATGGCGTGCATCTGAAGGGAGTAGAGGAACGTGTGAACTTGATGAGTAAGGCATGTGACAGGATTTCGGGACTACTCATGAGATTCGAAAGCACCG]
[-] EMBL CD142060             [                                                                                                                                                  CGGGACTTGACTTTCTTATTCGCTTTTGTTCTCCCGAATGATAGTTGACCACATTACTGTTGCCACG CGAGTTGTATCTCCGTTTGATACCAAGTCGTAAAGAAGTATCATGCTCAGTATCCCGCACATGCCGTCTTATATCTGTTTTCCCCATACCTGCCGAGTCATTGTAGCATTTTCTGAGCTGCAATTTATGGCGTGCATCTGAAGGGAGTAGAGGAACGTGTGAACTTGATGAGTAAGGCATGTGACAGGATTTCGGGACTACTCATGAGATTCGAAAGCAC  ]




>consensus_5407#0
GTGAAATCGATTCCCATAACCGTGTGGTCGTGTACTTAACAAGGGATTCCTGGATAAACT
AGTTACTTTCCGAGGAACAGTTTTGTTAATTCCCAGATTCCATTCTTCATCAGAATTATG
ACTTTCCGCACTAGGGTAGCCATAACCGGGACTTGACTTTCTTATTCGCTTTTGTTCTCC
CGAATGATAGTTGACCACATTACTGTTGCCACGCGAGTTGTATCTCCGTTTGATACCAAG
TCGTAAAGAAGTATCATGCTCAGTATCCCGCACATGCCGTCTTATATCTGTTTTCCCATA
CCTGCCGAGTCATTGTAGCATTTTCTGAGCTGCAATTTATGGCGTGCATCTGAAGGGAGT
AGAGGAACGTGTGAACTTGATGAGTAAGGCATGTGACAGGATTTCGGGACTACTCATGAG
ATTCGAAAGCACCG

clustalw multiple alignements is not computed in this case