cluster # 5441

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Schistosoma mansoni
cluster # 5441 cluster # 5441 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5441#0 length = 517 sequences # 3

consensusID : consensus_5441#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 517
fasta sequence

                              [ATTAAATGATACTGAAGCAATGTTTGTCAATGGATCAGAATCACTTTCCATATTTCAAGTATCTGAACCTGTTGTATACGCCGCGGTTGAACCTGGTAGTCGATCCGAAATAAATGCACTTGAACATGCTCTCAATTGCATGCAACGTGAAGATCCGAGCTTTCATGTGAAGTTTGATGGAGAAACTGGACAATGGATAATTTCCGGAATGGGTGATTTACAC-TTGGATGTTATACTTTCAAG-GTTGAAGCGT-GAATACAAAGTTAATGTTCGA-ATGGGACCCCTTTT-GATAGCTTACAAAGAATGTCCACCACAAGATGCTCCCAGTTCAAGTGGATGGAGCCGTGTGGTTGGATATATAAATGGTAGTGAGAAAGCTGTTGCAATAGGAGTGATACTCCAACCTAAAACTATGCATCCACTTCACAAACCTCAGGTCATTTTTGACCGCCTTGCAGATCATAAAATCGTTCGTATACGACATGCCATCACAGAAGCCTGTTTGTCTGCCCTAGAG]

[-] EMBL CD113350             [ATTAAATGATACTGAAGCAATGTTTGTCAATGGATCAGAATCACTTTCCATATTTCAAGTATCTGAACCTGTTGTATACGCCGCGGTTGAACCTGGTAGTCGATCCGAAATAAATGCACTTGAACATGCTCTCAATTGCATGCAACGTGAAGATCCGAGCTTTCATGTGAAGTTTGATGGAGAAACTGGACAATGGATAATTTCCGGAATGGGTGATTTACAC TTGGATGTTATACTTTCAAG GTTGAAGCGT GCATACAGAGTTAATGTTCGACATGGGACCCCTTTTAGATAGCTTACAAAGAATGTCCACCCCAAGATGATCCCAGTTCAAGTGGATGGAGCCGTGTGGTTGGATATATAAATGGTA                                                                                                                                                     ]
[+] EMBL CD084017             [                                                                                                     cgaggGAAATAAATGCACTTGAACATGCTCTCAATTGCATGCAACGTGAAGATCCGAGCTTTCATGTGAAGTTTGATGGAGAAACTGGACAATGGATAATTTCCGGAATGGGTGATTTACACATTGGATGTTATACTTTCAAGTGTTGAAGCGTAGAATACAAAGTTAATGTTCGA ATGGGACCCCTTTT GATAGCTTACAAAGAATGTCCACCACAAGATGCTCCCAGTTCAAGTGGATGGAGCCGTGTGGTTGGATATATAAATGGTAGTGAGAAAGCTGTTGCAATAGGAGTGATACTCCAACCTAAAACTATGCATCCACTTCACAAACCTCAGGTCATTTTTGACCGCCTTGCAGATCATAAAATCGTTCGTATACGACATGCCATCACAGAAGCCTGTTTGTCTGCCCTAGAG]
[+] EMBL CD118089             [                                                                                                                                                                                                                                                          AGCGT GAATACAAAGTTAATGTTCGA ATGGGACCCCTTTT GATAGCTTACAAAGAATGTCCACCACAAGATGCTCCCAGTTCAAGTGGATGGAGCCGTGTGGTTGGATATATAAATGGTAGTGAGAAAGCTGTTGCAATAGGAGTGATACTCCAACCTAAAACTATGCATCCACTTCACAAACCTCAGGTCATT                                                                           ]




>consensus_5441#0
ATTAAATGATACTGAAGCAATGTTTGTCAATGGATCAGAATCACTTTCCATATTTCAAGT
ATCTGAACCTGTTGTATACGCCGCGGTTGAACCTGGTAGTCGATCCGAAATAAATGCACT
TGAACATGCTCTCAATTGCATGCAACGTGAAGATCCGAGCTTTCATGTGAAGTTTGATGG
AGAAACTGGACAATGGATAATTTCCGGAATGGGTGATTTACACTTGGATGTTATACTTTC
AAGGTTGAAGCGTGAATACAAAGTTAATGTTCGAATGGGACCCCTTTTGATAGCTTACAA
AGAATGTCCACCACAAGATGCTCCCAGTTCAAGTGGATGGAGCCGTGTGGTTGGATATAT
AAATGGTAGTGAGAAAGCTGTTGCAATAGGAGTGATACTCCAACCTAAAACTATGCATCC
ACTTCACAAACCTCAGGTCATTTTTGACCGCCTTGCAGATCATAAAATCGTTCGTATACG
ACATGCCATCACAGAAGCCTGTTTGTCTGCCCTAGAG

clustalw multiple alignements is not computed in this case