cluster # 5446

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Schistosoma mansoni
cluster # 5446 cluster # 5446 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5446#0 length = 622 sequences # 3

consensusID : consensus_5446#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 622
fasta sequence

                              [CGAGGTGTATGACGGGATTGTGTTTAGATGCAGTATTAGAAATTATTCAAGCTGGTCAAGTGGCTATTTTTGAAGCAGATTATCGGAATTTAATGTCACTTAGGACATCAACATTGAAACCGT-TTATAA-TTTTTGTTAAACCACCAACGTTCGATGTTTTGTTGGAAACACGACAATCATATAATCATAAAAGTAGTAATTGTAATACACCAACAATAAATGATACAACATCAACTGTGGAATTATCACCAACACATTCTGTACCAACTACACCACATTTAACTAATCGTACTATTGGTGGTTGTTTTACACCTGTAAGAAACTCTCAACAATGGAGGAAAGTCTCCGGTGAATTAGGACAAGAGAAGAAAAACACAATGTCCTCAGCGCCATCATTATCAGCATCATCGTCTTTGGATAATATACTGGCTACGGAGATTCCAAAAAAAGTGTCCTTGGCAGAAACACACTTTCACGAAATGATTCAAACAGCATCTCGTCTCGAAGTAACACATGGCCATTTATGGGATTTTGTTTTAATCAATGATGATTTACCAGTGGCATTGGAGCAATTATCTGAAATGGCCTATCGTATTGAAACAGAAGCGCTAGGGTGGCACGC]

[+] EMBL CD083529             [CGAGGTGTATGACGGGATTGTGTTTAGATGCAGTATTAGAAATTATTCAAGCTGGTCAAGTGGCTATTTTTGAAGCAGATTATCGGAATTTAATGTCACTTAGGACATCAACATTGAAACCGT TTATAA TTTTTGTTAAACCACCAACGTTCGATGTTTTGTTGGAAACACGACAATCATATAATCATAAAAGTAGTAATTGTAATACACCAACAATAAATGATACAACATCAACTGTGGAATTATCACCAACACATTCTGTACCAACTACACCACATTTAACTAATCGTACTATTGGTGGTTGTTTTACACCTGTAAGAAACTCTCAACAATGGAGGAAAGTCTCCGGTGAATTAGGACAAGAGAAGAAAAACACAATGTCCTCAGCGCCATCATTATCAGCATCATCGTCTTTGGATAATATACTGGCTACGGAGATTCCAAAAAAAGTGTCCTTGGCAG                                                                                                                                                                ]
[+] EMBL CD083613             [     TGTATGACGGGATTGTGTTTAGAT CAGTATTAGAAATTATTCAAGCTGGTCAAGTGGCTATTTTTGAAGCAGATTATCGGAATTTAATGTCACTTAGGACATCAACATTGAAACCGTCTTATAACTTTTTGTTAAACCACCAACGTTCGATGTTTTGTTGGAAACACGACAATCATATAATCATAAAAGTAGTAATTGTAATACACCAACAATAAATGATACAACATCAACTGTGGAATTATCACCAACACATTCTGTACCAACTACACCACATTTAACTAATCGTACTATTGGTGGTTGTTTTACACCTGTAAGAAACTCTCAACAATGGAGGAAAGTCTCCGGTGAATTAGGACAAGAGAAGAAAAACACAATGTCCTCAGCGCCATCATTATCAGCATCATCGTCTTTGGATAATATACTGGCTACGGAGATACAAAAAAAAGTGTCATTGGCAGAAACACACTTTCACGAAATGATTCAAACAGCATCTCGTCTCGAAGTAACACATGGCCATTTA                                                                                                  ]
[+] EMBL CD190881             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTTCACGAAATGATTCAAACAGCATCTCGTCTCGAAGTAACACATGGCCATTTATGGGATTTTGTTTTAATCAATGATGATTTACCAGTGGCATTGGAGCAATTATCTGAAATGGCCTATCGTATTGAAACAGAAGCGCTAGGGTGGCACGC]




>consensus_5446#0
CGAGGTGTATGACGGGATTGTGTTTAGATGCAGTATTAGAAATTATTCAAGCTGGTCAAG
TGGCTATTTTTGAAGCAGATTATCGGAATTTAATGTCACTTAGGACATCAACATTGAAAC
CGTTTATAATTTTTGTTAAACCACCAACGTTCGATGTTTTGTTGGAAACACGACAATCAT
ATAATCATAAAAGTAGTAATTGTAATACACCAACAATAAATGATACAACATCAACTGTGG
AATTATCACCAACACATTCTGTACCAACTACACCACATTTAACTAATCGTACTATTGGTG
GTTGTTTTACACCTGTAAGAAACTCTCAACAATGGAGGAAAGTCTCCGGTGAATTAGGAC
AAGAGAAGAAAAACACAATGTCCTCAGCGCCATCATTATCAGCATCATCGTCTTTGGATA
ATATACTGGCTACGGAGATTCCAAAAAAAGTGTCCTTGGCAGAAACACACTTTCACGAAA
TGATTCAAACAGCATCTCGTCTCGAAGTAACACATGGCCATTTATGGGATTTTGTTTTAA
TCAATGATGATTTACCAGTGGCATTGGAGCAATTATCTGAAATGGCCTATCGTATTGAAA
CAGAAGCGCTAGGGTGGCACGC

clustalw multiple alignements is not computed in this case