cluster # 5486

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Schistosoma mansoni
cluster # 5486 cluster # 5486 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5486#0 length = 661 sequences # 3

consensusID : consensus_5486#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 661
fasta sequence

                              [TGGAATTTTAATATCAAGAAAGCAACTATATTTTCATGACAGGATTAGAAATTCATATTACCGGAGTAATTTACAACTTAGTGGTTGGATCTAAACATTTCTATTGAG-AAGTCCGGAATAAAACTATGGTTACGCTTAATACCAGAGAAACGTCAGAAAATTACGAAATACAAAGTAAACATTATGAAAAAAGATAAAATCACATAGAAGAACTGAAGGAAATTGAAAACAGGAATGATTATAAGCAGTAATGTTAATGGTTAGAAATGAAAAAAGTTAAACAGGTGAATGAAATAGATATACTTAGAAAATTAAACCGATGAAATTATAATTCTTTTCAAAACAATGATAGTGCAGAAATTAAGCCATAATCTCGTGTATTAATCCCAATCAAAAGGATTTGACGATCGTGGCTTGGAAAGATTTTGTTGTTGTTGCTGTTCACCGATCAGAGATTCATTGAAACCCACATCTAGAGACTCATGATGTTCAGATTTACGATTAAATGAATGAGATGTTATGTTTTCATTACCATCATCATCATCATTATTAAAATTGAGAGAATCATTGGGCTCATCAAATGGATTTAATGGTTTATGTACAGATAAATCAGATTGAGCTGGATTAGTAGATGAGAAATAACCAACAGATATAGATGATT]

[+] EMBL CD073637             [TGGAATTTTAATATCAAGAAAGCAACTATATTTTCATGACAGGATTAGAAATTCATATTACCGGAGTAATTTACAACTTAGTGGTTGGATCTAAACATTTCTATTGAG AAGTCCGGAATAAAACTATGGTTACGCTTAATACCAGAGAAACGTCAGAAAATTACGAAATACAAAGTAAACATTATGAAAAAAGATAAAATCACATAGAAGAACTGAAGGAAATTGAAAACAGGAATGATTATAAGCAGTAATGTTAATGGTTAGAAATGAAAAAAGTTAAACAGGTGAATGAAATAGATATACTTAGAAAATTAAACCGATGAAATTATAATTCTTTTCAAAACAATGATAGTGCAGAAATTAAGCCATAATCTCGTGTATTAATCCCAATCAAAAGGATTTGACGATCGTGGCTTGGAAAGATTTTGTTGTTGTTGCTGTTCACCGATCAGAGATTCATTGAAACCCACATCTAGAGACTCATGATGTTCAGATTTACGATTAAATGAATGAGATGTTATGTTTTCATTACCATCATCATCATCATTATTAAAATTGAGAGAATCATTGGGCTCATCAAATGGATTTAATGGTTTATGTACAGATAAATCAGATTGAGCTGGATTAGTAGATGAGAAATAACCAACAGATATAGATGATT]
[-] EMBL CD111791             [                                                                                                       aTGAGAAAGTNCCGAATAAAACTATGGTTACGCTTAATACCAGAGAAACGTCAGAAAATTACGAAATACAAAGTAAACATTATGAAAAAAGATAAAATCACATAGAAGAACTGAAGGAAACTGAAAACAGGAATGATTATAAGCAGTAATGTTAATGGTTAGAAATTAAAAAAGTTAAACAGGTGAATGAAATAGATATACTTAGAAAATTAAACCGATGAAACTATAATTCTTTTCAAAACAATGATAGTGCAGAAATTAAGCCATAATCTCGTGTATTAATCCCAATCAAAAGGATTTGACGATCGTGGCTTGGAAAG                                                                                                                                                                                                                                               ]
[-] EMBL CD178540             [                                                                                                                                                                                                                                      CAGGAATGATTATAAGCAGTAATGTTAATGGTTAGAAATGGAAAAAGTTAAACAGGTGAATGAAATAGATATACTTAGAAAATTAAACCGATGAAATTATAATTCTTTTCAAAACAATGATAGTGCAGAAATTAGGCCATAATCTCGTGTATTAATCCCAATCAAAAGGATTTGACGATCGTGGCTTGGAAAGATTTTGTTGTTGTTGCTGTTCACCGATCAGAGATTCATTGAAACCCACATCTAGAGACTCATGATGTTCAGATTTACGATTAAATGAATGAGATGTTATGCTTTCATTACCATCATCATCATCATTATTAA                                                                                                            ]




>consensus_5486#0
TGGAATTTTAATATCAAGAAAGCAACTATATTTTCATGACAGGATTAGAAATTCATATTA
CCGGAGTAATTTACAACTTAGTGGTTGGATCTAAACATTTCTATTGAGAAGTCCGGAATA
AAACTATGGTTACGCTTAATACCAGAGAAACGTCAGAAAATTACGAAATACAAAGTAAAC
ATTATGAAAAAAGATAAAATCACATAGAAGAACTGAAGGAAATTGAAAACAGGAATGATT
ATAAGCAGTAATGTTAATGGTTAGAAATGAAAAAAGTTAAACAGGTGAATGAAATAGATA
TACTTAGAAAATTAAACCGATGAAATTATAATTCTTTTCAAAACAATGATAGTGCAGAAA
TTAAGCCATAATCTCGTGTATTAATCCCAATCAAAAGGATTTGACGATCGTGGCTTGGAA
AGATTTTGTTGTTGTTGCTGTTCACCGATCAGAGATTCATTGAAACCCACATCTAGAGAC
TCATGATGTTCAGATTTACGATTAAATGAATGAGATGTTATGTTTTCATTACCATCATCA
TCATCATTATTAAAATTGAGAGAATCATTGGGCTCATCAAATGGATTTAATGGTTTATGT
ACAGATAAATCAGATTGAGCTGGATTAGTAGATGAGAAATAACCAACAGATATAGATGAT
T

clustalw multiple alignements is not computed in this case