cluster # 5544

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Schistosoma mansoni
cluster # 5544 cluster # 5544 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5544#0 length = 689 sequences # 3

consensusID : consensus_5544#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 689
fasta sequence

                              [TTGTATGTATGGTTATTGAATATATCAGTGCTAGAAAAAATCCATACAGATCTTGACTAGATACTGTCATTAATTTCACAAGAAAATAGAATTGGTTTACCGGTTTCTTTGTCTTGTTCCAAACGATTGAGACCATGAATTTTAACACCTTTTAGACATGTTAAGTTTTCACCATTGTAAGTAATCAAAGGTGAAATTTCAATTAAAGGCTTGTCATGAACACTATCTACGTGTCCATTCCCATTAGACGTAGAACTATCATTTACTAGTATTGCACCAGCATTTTCTGCTAAGCGAGTATGATAATTAAGTAAATCAAGTCGCGCTGTTTTAGGACAATCCTTAATTGTACCTGGTCCATTCTTAAGCGGAGAAAATTGTTCATCTCTAGGAACTTCCCATATAAAAAATCGTTTAGCAAATGGAAAAACATCGAATGCGAATTTTTCAAATTTGATTGCATTCGGTTTTTGAGGGACAATCAATTCTCCTGTTTGCAAATCTATACAAGTAACTTTCTTTTGAGCTCGATGATAGCGCATTTTCATTTGTATATCATCCTGACAAACGCGTTCCAAAAATGATCTCGTTGTGAAATGTACACAAATATTGCCATGGCTATAAACTAAACGACTGGTTTCACTATCATTTGGATTGTGTGCATTATTATGAGAGTCATATTGGTTTAC]

[+] EMBL CD111333             [TTGTATGTATGGTTATTGAATATATCAGTGCTAGAAAAAATCCATACAGATCTTGACTAGATACTGTCATTAATTTCACAAGAAAATAGAATTGGTTTACCGGTTTCTTTGTCTTGTTCCAAACGATTGAGACCATGAATTTTAACACCTTTTAGACATGTTAAGTTTTCATCATTGTAAGTAATCAAAGGTGAAATTTCAATTAAAGGCTTGTCATGAACACTATCAACGTGTCCATTCCCATTAGACGTAGAACTATCATTTACTAGTATTGCACCAGCATTTTCTGCTAAGCGAGTATGATAATTAAGTAAATCAAGTCGCGCTGTTTTAGGACAATCCTTAATTGTACCTGGTCCATTCTTAAGCGGAGAAAATTGTTCATCTCTAGGAACTTCCCATATNAAAAATCGTTTAGCCAATG                                                                                                                                                                                                                                                                         ]
[-] EMBL CD110878             [                                                                                                                CTGGTTCCAAACGATTGAGACCATGAATTTGAACACCTTTTAGACATGTTAAGTTTTCACCATTGTAAGTAATCAAAGGTGAAATTTCAATTAAAGGCTTGTCATGAACACTATCTACGTGTCCATTCCCATTAGACGTAGAACTATCATTTACTAGTATTGCACCAGCATTTTCTGCTAAGCGAGTATGATAATTAAGTAAATCAAGTCGCGCTGTTTTAGGACAATCCTTAATTGTACCTGGTCCATTCTTAAGCGGAGAAAATTGTTCATCTCTAGGAACTTCCCATATAAAAAATCGTTTAGCAAATGGAAAAACATCGAATGCGAATTTTTCAAATTTGATTGCATTCGGTTTTTGAGGGACAATCAATTCTCCTGTTTGCAAATCTATACAAGTAACTTTCTTTTGAGCTCGATGATAGCGCATTTTCATTTGTAT                                                                                                                                       ]
[+] EMBL CD126340             [                                                                                                                                                ACACCTTTTAGACATGTTAAGTTTTCACCATTGTAAGTAATCAAAGGTGAAATTTCAATTAAAGGCTTGTCATGAACACTATCTACGTGTCCATTCCCATTAGACGTAGAACTATCATTTACTAGTATTGCACCAGCATTTTCTGCTAAGCGAGTATGATAATTAAGTAAATCAAGTCGCGCTGTTTTAGGACAATCCTTAATTGTACCTGGTCCATTCTTAAGCGGAGAAAATTGTTCATCTCTAGGAACTTCCCATATAAAAAATCGTCTAGCAAATGGAAAAACATCGAATGCGAATTTTTCAAATTTGATTGCATTCGGTTTTTGAGGGACAATCAATTCTCCTGTTTGCAAATCTATACAAGTAACTTTCTTTTGAGCTCGATGATAGCGCATTTTCATTTGTATATCATCCTGACAAACGCGTTCCAAAAATGATCTCGTTGTGAAATGTACACAAATATTGCCATGGCTATAAACTAAACGACTGGTTTCACTATCATTTGGATTGTGTGCATTATTATGAGAGTCATATTGGTTTAC]




>consensus_5544#0
TTGTATGTATGGTTATTGAATATATCAGTGCTAGAAAAAATCCATACAGATCTTGACTAG
ATACTGTCATTAATTTCACAAGAAAATAGAATTGGTTTACCGGTTTCTTTGTCTTGTTCC
AAACGATTGAGACCATGAATTTTAACACCTTTTAGACATGTTAAGTTTTCACCATTGTAA
GTAATCAAAGGTGAAATTTCAATTAAAGGCTTGTCATGAACACTATCTACGTGTCCATTC
CCATTAGACGTAGAACTATCATTTACTAGTATTGCACCAGCATTTTCTGCTAAGCGAGTA
TGATAATTAAGTAAATCAAGTCGCGCTGTTTTAGGACAATCCTTAATTGTACCTGGTCCA
TTCTTAAGCGGAGAAAATTGTTCATCTCTAGGAACTTCCCATATAAAAAATCGTTTAGCA
AATGGAAAAACATCGAATGCGAATTTTTCAAATTTGATTGCATTCGGTTTTTGAGGGACA
ATCAATTCTCCTGTTTGCAAATCTATACAAGTAACTTTCTTTTGAGCTCGATGATAGCGC
ATTTTCATTTGTATATCATCCTGACAAACGCGTTCCAAAAATGATCTCGTTGTGAAATGT
ACACAAATATTGCCATGGCTATAAACTAAACGACTGGTTTCACTATCATTTGGATTGTGT
GCATTATTATGAGAGTCATATTGGTTTAC

clustalw multiple alignements is not computed in this case