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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5681 cluster # 5681       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5681#0 length = 904 sequences # 3  

consensusID : consensus_5681#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 904
fasta sequence
                              [TTTGTAAGTCCTCTATGGTAATGTAATAACACGATGCGTAATTCTGAAGTTTGAGAAAAATTTAATTCAAATCATTAAGTATTTAATAATGACAGTATAAGTAAAAAGAAATATAAAAGGAAAATAATATTAAATGCAATCAGTTTGAGATTACAGAATGTTTCTGTTAGAAGAAAAACACAATCAGAAAAATCGATTTTGGTTGTCGATTATATAACGATATTTATAGTCATAATCATAGTAACGCATAAATGATACACACACACATGACTAAACGAGGAAAGAAAAGACAGGAAACAATCATTGTACTAAATTATGCAGCAGTTATGATAGCCTTGAATAATACAATATTCAATGAAATTTGATAATTTAGAGAGGCATTTCAAATTCGTATTTTTCTTCTTCAAACTCCTCCCAGTTAGCGACAAAATTATTTCCTTTATTGTTTTGCAAATTTTGCACTTCACTAGAGTTTCCTGAACCATTTTCAATTTGACTTTTGAGTTCAAGAAGTTCTTGTTGTGCATTCAATAGTTCAGCTGCAAGTGCATCACGTTCTGAACGAACAAGTTGACATTCCATTTCATAATTAGCAAGTGGAATATCCTGCACATTAGTTGAACTGGACATGCGAAGAGGTTCAACTGCTTTTGCTTTACTTCCATCTGATGTTACTGTGTCTTTAGATTGGGCTAGATGATGTAGGCTGTTCTGGAATCTCAATCCTCAAATCTTTCAGCAGTCCACGTAAATCAGTTAATACAGAACGTAATGAGCCCAAGCGAAAATCCATTTCAACCATTGCCAATTCATCAGGAGTATGCGTACCAACTTTACTACAAGATTCTTGTTTCGTTCCAGTGAAAGCATATAATTCAACACACATCTGGTTAATCTGCTGATA]

[+] EMBL CD077034             [TTTGTAAGTCCTCTATGGTAATGTAATAACACGATGCGTAATTCTGAAGTTTGAGAAAAATTTAATTCAAATCATTAAGTATTTAATAATGACAGTATAAGTAAAAAGAAATATAAAAGGAAAATAATATTAAATGCAATCAGTTTGAGATTACAGAATGTTTCTGTTAGAAGAAAAACACAATCAGAAAAATCGATTTTGGTTGTCGATTATATAACGATATTTATAGTCATAATCATAGTAACGCATAAATGATACACACACACATGACTAAACGAGGAAAGAAAAGACAGGAAACAATCATTGTACTAAATTATGCAGCAGTTATGATAGCCTTGAATAATACAATATTCAATGAAATTTGATAATTTAGAGAGGCATTTCAAATTCGTATTTTTCTTCTTCAAACTCCTCCCAGTTAGCGACAAAATTATTTCCTTTATTGTTTTGCAAATTTTGCACTTCACTAGAGTTTCCTGAACCATTTTCAATTTGACTTTTGAGTTCAAGAAGTTCTTGTTGTGCATTCAATAGTTCAGCTGCAAGTGCATCACGTTCTGAACGAACAAGTTGACATTCCATTTCATAATTAGCAAGTGGAATATCCTGCACATTAGTTGAACTGGACATGCGAAGAGGTTCAACTGCT                                                                                                                                                                                                                                                               ]
[+] EMBL CD196762             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCATTTTCAATTTGACTTTTGAGTTCAAGAAGTTCTTGTTGTGCATTCAATAGTTCAGCTGCAAGTGCATCACGTTCTGAACGAACAAGTTGACATTCCATTTCATAATTAGCAAGTGGAATATCCTGCACATTAGTTGAACTGGACATGCGAAGAGGTTCAACTGTTTTTGCTTTACTTCCATCTGATGTTACTGTGTCTTTAGATTGGGCTAGATGATGTAGGCTGTTCTGGAATCTCAATCCTCAAATCTTTCAGCAGTCCACGTAAATCAGTTAATACAGAACGTAATGAGCCCAAGCGAAAATCCATTTCAACCATTGCCAATTCATCAGGAGTATGCGTACCAACTTTACTACAAGATTCTTGTTTCGTTCCAGTGAAAGCATATAATTCAACACACATCTGGTTAATCTGCTGATA]
[-] EMBL CD084058             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTTACTGTGTCTTTAGATT GGCTAGATGATGTAGGCTGTTCTGGAATCTCAATCCTCAAATCTTTCAGCAGTCCACGTAAATCAGTTAATACAGAACGTAATGAGCCCAAGCGAAAATCCATATCAACCATTGCCAAT                                                                                               ]


>consensus_5681#0 TTTGTAAGTCCTCTATGGTAATGTAATAACACGATGCGTAATTCTGAAGTTTGAGAAAAA TTTAATTCAAATCATTAAGTATTTAATAATGACAGTATAAGTAAAAAGAAATATAAAAGG AAAATAATATTAAATGCAATCAGTTTGAGATTACAGAATGTTTCTGTTAGAAGAAAAACA CAATCAGAAAAATCGATTTTGGTTGTCGATTATATAACGATATTTATAGTCATAATCATA GTAACGCATAAATGATACACACACACATGACTAAACGAGGAAAGAAAAGACAGGAAACAA TCATTGTACTAAATTATGCAGCAGTTATGATAGCCTTGAATAATACAATATTCAATGAAA TTTGATAATTTAGAGAGGCATTTCAAATTCGTATTTTTCTTCTTCAAACTCCTCCCAGTT AGCGACAAAATTATTTCCTTTATTGTTTTGCAAATTTTGCACTTCACTAGAGTTTCCTGA ACCATTTTCAATTTGACTTTTGAGTTCAAGAAGTTCTTGTTGTGCATTCAATAGTTCAGC TGCAAGTGCATCACGTTCTGAACGAACAAGTTGACATTCCATTTCATAATTAGCAAGTGG AATATCCTGCACATTAGTTGAACTGGACATGCGAAGAGGTTCAACTGCTTTTGCTTTACT TCCATCTGATGTTACTGTGTCTTTAGATTGGGCTAGATGATGTAGGCTGTTCTGGAATCT CAATCCTCAAATCTTTCAGCAGTCCACGTAAATCAGTTAATACAGAACGTAATGAGCCCA AGCGAAAATCCATTTCAACCATTGCCAATTCATCAGGAGTATGCGTACCAACTTTACTAC AAGATTCTTGTTTCGTTCCAGTGAAAGCATATAATTCAACACACATCTGGTTAATCTGCT GATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)