cluster # 5709

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Schistosoma mansoni
cluster # 5709 cluster # 5709 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5709#0 length = 533 sequences # 3

consensusID : consensus_5709#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 533
fasta sequence

                              [TTTCCCGTATATTTATTTGCTAATTACAAAACTGAAATCAAAGAAATAAAGAAGGAAAGAGAAGAGAAGAAAAGATGATTCGATAAAGTA-CCATTTAATTACTAGTAAGTAACTCAAGACTTAATACAAGCAACAATAAAAACAGAAATAATAAAGTATAGCAAGCA-CATCAATTTTGGGAATATTGCTTTGCATTCTATTACAAAAGTTGAAAAAAAAGGGGAAACAAAAGGGAATAAGATTTTTTCACCCCAGAAACCAAGAAACAACGACCAACTCCAGTATATTTATATGTGAAGAGATATGTATGCATATCTCTATAGTCATTTAACTGTGAAAACCCTTATTCATGAGGTATTTTGTTTTTAGCAAGACACTTCAAATACAAAAGAGGAGTACCTTTTATATCAAGGGAGAAAAATCCTACTGGATGCCACCCAAAAAATGTACCCTCTTTTTATCATTTTGTTTTTCATTCATGAATGTATCAACAAACAACAACAACAATAGAATCGATCTTTTTGGGGTAACTC]

[+] EMBL AA999507             [TTTCCCGTATATTTATTTGCTAATTACAAAACTGAAATCAAAGAAATAAAGAAGGAAAGAGAAGAGAAGAAAAGATGATTCGATAAAGTA CCATTTAATTACTAGTAAGTAACTCAAGACTTAATACAAGCAACAATAAAAACAGAAATAATAAAGTATAGCAAGCA CATCAATTTTGGGAATATTGCTTTGCATTCTATTACAAAAGTTGAAAAAAAAGGGGAAACAAAAGGGAATAA                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BF936184             [    CCGTATATTTATTTGCTAATTACAAAACTGAAATCAAAGAAATAAAGAAGGAAAGAGAAGAGAAGAAAAGATGATTCGATAAAGTACCCATTTAATTACTAGTAAGTAACTCAAGACTTAATACAAGCCACAATAAAAACAGAAATAATAAAGTATAGCAAGCACCATCAATTTT GGAATATTGCTTTGCATTCTATTACAAAAGTTGAAAAAAAAGGAGAAACAAAAGAGAATAAGATTTTTTCACCCCAGAAACCAAGAAACAACGACCAACTCCAGTATATTTATATGTGAAGAGATATGTATGCATATCTCTATAGTCATTTAACTGTGAAAACCCTTATTCATGAGGTATTTTGTTTTTAGCAAGACACTTCAAATACAAAAGAGGAGTACCTTTTATATCAAGGGAGAAAAATCCTACTGGATGCCACCCAAAAAATGTACCCTCTTTT                                                                           ]
[-] EMBL BF440147             [                                                                                                                                                                                                                                                                                                                                                                 GAGGTATTTTGTTTTTAGCAAGACACTTCAAATACAAAAGAGGAGTA TTTTTATATCAAGGGAGAAAAATCCTACTGGATGCAACCGAAAAAATGTA CCTCTTTTTATCATTTTGTTTTTCATTCATGAATGTATCAACAAACAACAACAACAATAGAATCGATCTTTTTGGGGTAACTC]




>consensus_5709#0
TTTCCCGTATATTTATTTGCTAATTACAAAACTGAAATCAAAGAAATAAAGAAGGAAAGA
GAAGAGAAGAAAAGATGATTCGATAAAGTACCATTTAATTACTAGTAAGTAACTCAAGAC
TTAATACAAGCAACAATAAAAACAGAAATAATAAAGTATAGCAAGCACATCAATTTTGGG
AATATTGCTTTGCATTCTATTACAAAAGTTGAAAAAAAAGGGGAAACAAAAGGGAATAAG
ATTTTTTCACCCCAGAAACCAAGAAACAACGACCAACTCCAGTATATTTATATGTGAAGA
GATATGTATGCATATCTCTATAGTCATTTAACTGTGAAAACCCTTATTCATGAGGTATTT
TGTTTTTAGCAAGACACTTCAAATACAAAAGAGGAGTACCTTTTATATCAAGGGAGAAAA
ATCCTACTGGATGCCACCCAAAAAATGTACCCTCTTTTTATCATTTTGTTTTTCATTCAT
GAATGTATCAACAAACAACAACAACAATAGAATCGATCTTTTTGGGGTAACTC

clustalw multiple alignements is not computed in this case