Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5729 cluster # 5729       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5729#0 length = 598 sequences # 3  

consensusID : consensus_5729#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 598
fasta sequence
                              [GAGTAGTGGTAGTCGTAAGCATTCTTCACATACTGCAAGTAATAATTCCAATCATACTCCTAATAATACTTCGAATACGTCTCAATTATGCTGTAATAGTCCGTTAAGTCCTTCCTTAGGTAAATGTTATGAAGATAATTGTGGCTCAAGTAGACTGACAAAAGATTCCAATACAAGTATGAATACACCATTTTCATCTCATTCAATTGGTTCGCCTAATTCATTCAGTAGTGTAAGTGTTGTTGACTCGTCACTTACACGTACAGGCGCACGTACAACTGGTATTGGCCACATTGGGACTAATTCATCCATGAATAACCAGCCAAATACATCACTTTCTATATGGATAGACGATGGACGACTTTACTGTGGGCATAAATGCTATCAGATTGGTGCGTCAGTTATCTTAGAAGGTCGTGATGGTTCAAGTCATCGATGCACTGGTACAATAGCATCCATTGGTGTTCAAGATATAGCGATACGAAGATGTTCAGATCATGGAATATGTCGTGTAACTGTACAACAATTAAAACAAGGACGATATGCAATATGGCCAAATAAATCTGAATAGACTAACTTCACCTTCCCCCGAGCCACT]

[+] EMBL CD178875             [GAGTAGTGGTAGTCGTAAGCATTCTTCACATACTGCAAGTAATAATTCCAATCATACTCCTAATAATACTTCGAATACGTCTCAATTATGCTGTAATAGTCCGTTAAGTCCTTCCTTAGGTAAATGTTATGAAGATAATTGTGGCTCAAGTAGACTGACAAAAGATTCCAATACAAGTATGAATACACCATTTTCATCTCATTCAATTGGTTCGCCTAATTCATTCAGTAGTGTAAGTGTTGTTGACTCGTCACTTACACGTACAGGCGCACGTACAACTGGTATTGGCCACATTGGGACTAATTCATCCATGAATAACCAGCCAAATACATCACTTTCTATATGGATAGACGATGGACGACTTTACTGTGGGCATAAATGCTATCAGATTGGTGCGTCAGTTATCTTAGAAGGTCGTGATGGTTCAAGTCATCGATGCACTGGTACAATAGCATCCATTGGTGTTCAAGATATAGCGATACGAAGATGTTCAGATCATGGAATATGTCGTGTAACTGTACAACAATTAAAACAAGGACGATATGNCATATGGCCAAATAAATCTGAATAG                           ]
[+] EMBL CD178528             [                                                                                                                                                                                                                                                      ttggcCACTNACACACACAGGCGCACGTACAACTGGTATTGGCCACATTGGGACTAATTCATCCATGAATAACCAGCCAAATACATCACTTTCTATAAGGATAGACGATGGACGACTTTACTGTGGGCATAAATGCTATCAGATTGGTGCGTCAGTTATCTTAGAAGGTCGTGATGGTTCAAGTCATCGATGCACTGGTACAATAGCATCCATTGGTGTTCAAGATATAGCGATACGAAGATGTTCAGATCATGGAATATGTCGTGTAACTGTACAACAATTAAAACAAGGACGATATGCAATATGGCCAAATAAATCTGAATAG                           ]
[-] EMBL CD136299             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GTGTTCAAGATATAGCGATACGAAGATGTTCAGATCATGGAATATGTCGTGTAACTGTACAACAATTAAAACAAGGGCGATATGCAATATGGCCAAATAAATCTGAATAGACTAACTTCACCTTCCCCCGAGCCACT]


>consensus_5729#0 GAGTAGTGGTAGTCGTAAGCATTCTTCACATACTGCAAGTAATAATTCCAATCATACTCC TAATAATACTTCGAATACGTCTCAATTATGCTGTAATAGTCCGTTAAGTCCTTCCTTAGG TAAATGTTATGAAGATAATTGTGGCTCAAGTAGACTGACAAAAGATTCCAATACAAGTAT GAATACACCATTTTCATCTCATTCAATTGGTTCGCCTAATTCATTCAGTAGTGTAAGTGT TGTTGACTCGTCACTTACACGTACAGGCGCACGTACAACTGGTATTGGCCACATTGGGAC TAATTCATCCATGAATAACCAGCCAAATACATCACTTTCTATATGGATAGACGATGGACG ACTTTACTGTGGGCATAAATGCTATCAGATTGGTGCGTCAGTTATCTTAGAAGGTCGTGA TGGTTCAAGTCATCGATGCACTGGTACAATAGCATCCATTGGTGTTCAAGATATAGCGAT ACGAAGATGTTCAGATCATGGAATATGTCGTGTAACTGTACAACAATTAAAACAAGGACG ATATGCAATATGGCCAAATAAATCTGAATAGACTAACTTCACCTTCCCCCGAGCCACT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)