Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5735 cluster # 5735       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5735#0 length = 555 sequences # 3  

consensusID : consensus_5735#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 555
fasta sequence
                              [TGGCGCAAAAACATCCACAAGGCCATAGTTCTCGTGATGTTAGGTGGTGGTAGATGTGTTTGCTCTCGATAATTTCCCAGGGATTCAGTAGATGCACGAGCGACCTGATGTAGACTTGTCTCTATGATATGCTTGTGCCGATCAATTTTCCATATTCAGCGGAGACATATCAGAAACAGTTCCTCAATCCTTCCACACCACTTGCAGGGTCACTTTCAGTTTTCCCGAATGTGTTGCATTACTCTGAAAAGGTGGCAGCAATGTTTAATGGTCTACGAATTGGACCGTCTTTGAGATGTGCCAACTTGATTCCACAAAAAGGCCCTCAACACATTATTGGAGGT-CCAGTTTTAGCAGTTGTCAAGTCAACTTTTTCTCCTGTTGGATATGGGAATTCTCAGAGGCTTGAAAATGGATTCACTTTTCAGCCAAGTCTCACCCAAAAAGTGTACATGCCTGAAAAGTCTTTGGGATTTGGTGCTTTTGGTGTTGTGTGGTTGGTCGTTGATCCGCGAACAGGCGACCAGGTCGCTCTTAAGAGAATCCCCAACATTT]

[+] EMBL CD133483             [TGGCGCAAAAACATCCACAAGGCCATAGTTCTCGTGATGTTAGGTGGTGGTAGATGTGTTTGCTCTCGATAATTTCCCAGGGATTCAGTAGATGCACGAGCGACCTGATGTAGACTTGTCTCTATGATATGCTTGTGCCGATCAATTTTCCATATTCAGCGGAGACATATCAGAAACAGTTCCTCAATCCTTCCACACCACTTGCAGGGTCACTTTCAGTTTTCCCGAATGTGTTGCATTACTCTGAAAAGGTGGCAGCAATGTTTAATGGTCTACGAATTGGACCGTCTTTGAGATGTGCCAACTTGATTCCACAAAAAGGCCCTCAACACATTATTGGAGGT CCAGTTTTAGCAGTTGTCAAGTCAACTTTTTCTCCTGTTGGATATGGGAATCCTCAGAGGCTTGAAAATGGATTCACTGTTCAGCCAAGTCTCACCCGAAAAGTGTACATGCCTGAAGAGTCTNTGCGATTTGGTGCTTCTGGTGTTGTGAGGACTGTCGTTGATCCGC                                          ]
[+] EMBL CD095666             [                                                         GTTTGCTCTCGATAATTTCCCAGGGATTCAGTAGATGCACGAGCGACTTGATGTAGACTTGTCTCTATGATATGCTTGTGCCGATCAATTTTCCATATTCAGCGGAGACATATCAGAAACAGTTCCTCAATCCTTCCACACCACTTCCAGGGTCACTTTCAGTTTTCCCGAATGTGTTGCATTACTCTGAAAAGGTGGCAGCAATGTTTAATGGTCTACAAATTGGACCGTTTTTGAGATGTGCCAACTTGATTCCACAAAAAGGCCCTCAACACATTATTGGAGGT CCAGTTTTAGCAGTTGTCAAGTCAACTTTTTCTCCTGTTGGATATGGGAATTCTCAGAGGCTTGAAAATGGATTCACTTTTCAGCCAAGTCTCACCCAAAAAGTGTACATGCCTGAAAAGTCTTTGGGATTTGGTGCTTTTGGTGTTGTGTGGTTGGTTGTTGATCCGCGAACAGGCGACCAGGTCGCTCTTAAGAGAATCCCCAACATTT]
[+] EMBL CD063953             [                                                                                                                                                                                                                                                                                                                                tatCCCCAACACATTATTGGAGGTCCCAGTTTTAGC GTTGTCAAGTCAACTTTTTCTCCTGTTGGATATGGGAATTCTCAGAGGCTTGAAAATGGATTCACTTTTCAGCCAAGTCTCACCCAAAAAGTGTACATGCCTGAAAAGTCTTTGGGATTTGGTGCTTTTGGTGTTGTGTGGTTG                                                       ]


>consensus_5735#0 TGGCGCAAAAACATCCACAAGGCCATAGTTCTCGTGATGTTAGGTGGTGGTAGATGTGTT TGCTCTCGATAATTTCCCAGGGATTCAGTAGATGCACGAGCGACCTGATGTAGACTTGTC TCTATGATATGCTTGTGCCGATCAATTTTCCATATTCAGCGGAGACATATCAGAAACAGT TCCTCAATCCTTCCACACCACTTGCAGGGTCACTTTCAGTTTTCCCGAATGTGTTGCATT ACTCTGAAAAGGTGGCAGCAATGTTTAATGGTCTACGAATTGGACCGTCTTTGAGATGTG CCAACTTGATTCCACAAAAAGGCCCTCAACACATTATTGGAGGTCCAGTTTTAGCAGTTG TCAAGTCAACTTTTTCTCCTGTTGGATATGGGAATTCTCAGAGGCTTGAAAATGGATTCA CTTTTCAGCCAAGTCTCACCCAAAAAGTGTACATGCCTGAAAAGTCTTTGGGATTTGGTG CTTTTGGTGTTGTGTGGTTGGTCGTTGATCCGCGAACAGGCGACCAGGTCGCTCTTAAGA GAATCCCCAACATTT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)