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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5820 cluster # 5820       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5820#0 length = 749 sequences # 3  

consensusID : consensus_5820#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 749
fasta sequence
                              [GGAACTATGGAAAAAGGAGGCGAAGGGCAGCTTCGCAGCATTTGTAGTATTGGTCTCAAAACTGTTGTTAATGCTTTACCGAATGCAACGGATATGGTAGTCATTCAATCAGCTGTTCGTGAAGCCATCTCTCCTTTATTACATATGGTTATGTCACATCAAGATGATAATGTACGCGTTGAAGCTTGTGAAGTTTTAGCTGAAATTATTAATCA-TTTGGAAATCTTCTGACAAGTTATCACTTGGATTTACTTGATAGCATGATCACTTGCCTTGGCTGTCCACAAACTACTCTACGTAAACGTGCTATTCAAGCATTGGGTTATCTGTCATGGAATTATACCACAAAAATATTTCAGTTCACTTGTCAGCTTCCTTCTTTTCCGTTTACAAATGAGTCCTTTTTTAACATCAAAACCAATGGAGAAATTTGACGATCATTTGTCAAAATTGATTACTGAGAATACATTATTTCAACGACCACATTTATTGGAACAACTAAAACAAGTACCTTCTGTAGATGTTATGAAAACCTTACTTCAATGCTTCAATGTTGTTTCTCGTCAACTTCAACGTTCACCTCATTGTATTGCATCAGTACTCCGACTACTCATATCGATTGCATACAGTTCTAATACAAATAATCCAGAACAGGATGATACTTGTAGAGTTAGTTATTCAAGTATTGGAAACAATAATTCGACGTTGTCCTAGAGTGATTTCCCCTTCTCTTGCCTGAACTGATTAAT]

[+] EMBL CD195745             [GGAACTATGGAAAAAGGAGGCGAAGGGCAGCTTCGCAGCATTTGTAGTATTGGTCTCAAAACTGTTGTTAATGCTTTACCGAATGCAACGGATATGGTAGTCATTCAATCAGCTGTTCGTGAAGCCATCTCTCCTTTATTACATATGGTTATGTCACATCAAGATGATAATGTACGCGTTGAAGCTTGTGAAGTTTTAGCTGAAATTATTAATCATTTTGGAAATCTTCTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD064472             [                                                                                                                                          aagCATATGGTAATGTCACATCAAGATGATAATGTACGCGTTGAAGCTTGTGAAGTTTCAGCTGAAATTATTAATCA TTAGGAAATCTTCTGACAAGTTATCACTTGGATTTACTTGATAGCATGATCACTTGCCTTGGCTGTCCACAAACTACTCTACGTAAACGTGCTATTCAAGCATTGGGTTATCTGTCATGGAATTATACCACAAAAATATTTCAGTTCACTTGTCAGCTTCCTTCTTTTCCGTTTACAAATGAGTCCTTTTTTAACATCAAAACCAATGGAGAAATTTGACGATCATTTGTCAAAATTGATTACTGAGAATACATTATTTCAACGACCACATTTATTGGAACAACTAAAACAAGTACCTTCTGTAGATGTTATGAAAACCTTACTTCAATGCTTCAATGTTGTTTCTCGTCAACTTCAACGTT                                                                                                                                                                            ]
[-] EMBL CD064421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGTAGATGTTATGAAAACCTTACTTCAATGCTTCAATGTTGTTTCTCGTCAACTTCAACGTTCACCTCATTGTATTGCATCAGTACTCCGACTACTCATATCGATTGCATACAGTTCTAATACAAATAATCCAGAACAGGATGATACTTGTAGAGTTAGTTATTCAAGTATTGGAAACAATAATTCGACGTTGTCCTAGAGTGATTTCCCCTTCTCTTGCCTGAACTGATTAAT]


>consensus_5820#0 GGAACTATGGAAAAAGGAGGCGAAGGGCAGCTTCGCAGCATTTGTAGTATTGGTCTCAAA ACTGTTGTTAATGCTTTACCGAATGCAACGGATATGGTAGTCATTCAATCAGCTGTTCGT GAAGCCATCTCTCCTTTATTACATATGGTTATGTCACATCAAGATGATAATGTACGCGTT GAAGCTTGTGAAGTTTTAGCTGAAATTATTAATCATTTGGAAATCTTCTGACAAGTTATC ACTTGGATTTACTTGATAGCATGATCACTTGCCTTGGCTGTCCACAAACTACTCTACGTA AACGTGCTATTCAAGCATTGGGTTATCTGTCATGGAATTATACCACAAAAATATTTCAGT TCACTTGTCAGCTTCCTTCTTTTCCGTTTACAAATGAGTCCTTTTTTAACATCAAAACCA ATGGAGAAATTTGACGATCATTTGTCAAAATTGATTACTGAGAATACATTATTTCAACGA CCACATTTATTGGAACAACTAAAACAAGTACCTTCTGTAGATGTTATGAAAACCTTACTT CAATGCTTCAATGTTGTTTCTCGTCAACTTCAACGTTCACCTCATTGTATTGCATCAGTA CTCCGACTACTCATATCGATTGCATACAGTTCTAATACAAATAATCCAGAACAGGATGAT ACTTGTAGAGTTAGTTATTCAAGTATTGGAAACAATAATTCGACGTTGTCCTAGAGTGAT TTCCCCTTCTCTTGCCTGAACTGATTAAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)