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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5882 cluster # 5882       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5882#0 length = 985 sequences # 3  

consensusID : consensus_5882#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 985
fasta sequence
                              [CATCATTCGGTCTCACCATACCCTCTGTCTATGCCCTCATCGATCCAGAGATCGACACATGATGAGTTCTAATTCGATTCATGTGTCTAAATATTGAATAAATTGGAAATCCCGTGTTCAAACATCAACCTAATTGGTATTGGACGGATTTTGCCAATTGAATTCGAGAAAACCTGTTTTTTTTTCACACAATCACAAGCCTTTTCTTCTCATTCCCACCTCAGTTTTTTCTAAAGCCGCAATCGGTGTTTCGTTTCATCCAGTTCCTGACTTCAAATGTTTGCTAGAGTTGGATGAATAATCATCGCCGTTTATTCATCTCTCAGCTAGAAGCATCTAGCTTTTTGATCTGGGTTGTATGGTATTTCAATGCTTTTTCTGAGAGGATGAGGTATTAAAGACATGGACTTTGACGCTCGAGGCCTTAGGCTTTCGGTTCCACAGGGCCTCTTCAGTAAGTCCTTTATCTCATCAGACCCAGGCAAGTCAGTCAGCCTCAAACCTGCTTGAAGTTGTGTATGGATTTGTATATCGGCTAAACAAGTACTGTCGTGTTCCTGTCTGTTGAAAACATCAGTACGACTTCTCATGGCAATGTTTGTTTGACTACGTTCACAATTGTGCTGTCGTCTGACAATAATTGAGCCGTATACTTAAGCAGTATTGCTGGGATGACCATACGTGTCTAGGTTTGGTGCACCTTTTAACGGTTTCAGATGTTAGACTTGTTCAAACCTCATGGCACCATCGTTTACAATCATCGCACTACATGTTGCTTTTTACGGAGCATCGGCAACTCAAGGTTAGCAACTTCCTTTATTATTATATGCCGTCACCGTTCAAAGATTTTAACATAAAGACTGAGAACGAGCCGTGTCAAAAATTGACAATTAAGAGAGTTAAGCAGAAGCCGACTTGTATGAGAACTGCGAAGTCCTAAATATGTAATAAAAACCCAAAAAAATATCCTGTTCAAATAAAAGAG]

[+] EMBL CD082354             [CATCATTCGGTCTCACCATACCCTCTGTCTATGCCCTCATCGATCCAGAGATCGACACATGATGAGTTCTAATTCGATTCATGTGTCTAAATATTGAATAAATTGGAAATCCCGTGTTCAAACATCAACCTAATTGGTATTGGACGGATTTTGCCAATTGAATTCGAGAAAACCTGTTTTTTTTTCACACAATCACAAGCCTTTTCTTCTCATTCCCACCTCAGTTTTTTCTAAAGCCGCAATCGGTGTTTCGTTTCATCCAGTTCCTGACTTCAAATGTTTGCTAGAGTTGGATGAATAATCATCGCCGTTTATTCATCTCTCAGCTAGAAGCATCTAGCTTTTTGATCTGGGTTGTATGGTATTTCAATGCTTTTTCTGAGAGGATGAGGTATTAAAGACATGGACTTTGACGCTCGAGGCCTTAGGCTTTCGGTTCCACAGGGCCTCTTCAGTAAGTCCTTTATCTCATCAGACCCAGGCAAGTCAGTCAGCCTCAAACCTGCTTGAAGTTGTGTATGGATTTGTATATCGGCTAAACAAGTACTGTCGTGTTCCTGTCTGTTGAAAACATCAGTACGACTTCTCATGGgc                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CD115508             [                                                                                                                                                                        AAAACCTGTTTCTTTTT ACACAATCACAAGCCTTTTCTTCTCATTCCCACCTCAGTTTTTTCTAAAGCCGCAATCGGTGTTTCGTTTCATCCAGTTCCTGACTTCAAATGTTTGCTAGAGTTGGATGAATAATCATCGCCGTTTATTCATCTCTCAGCTAGAAGCATCTAGCTTTTTGATCTGGGTTGTATGGTATTTCAATGCTTTTTCTGAGAGGATGAGGTATTAAAGACATGGACTTTGACGCTCGAGGCCTTAAGCTTTTGGTTCCACAGGGCCTCTTCAGTAAGTCCTTTATCTCATCAGACCCAGGCAAGTCAGTCAGCCTCAAACCTGCTTGAAGTTGTGTATGGATTTGTATATCGGCTAAACAAGTACTGTCGTGTTCCTGTCTGTTGAAAACATCAGTACGACTTCTCATGGCAATGTTTGTTTGACTACGTTCACAATTGTGCTGTCGTCTGACAATAATTGAGCCGTATACTTAAGCAGTATTGCTGGGATGACCATACGTGTCTAGGTTT                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CD075955             [                                                                                                                                                                                                                                                                                                                                                                                                                                 CGAGGCCTTAGGCTTTCGGTTCCACAGGGCCTCTTCAGTAAGTCCTTTATCTCATCAGACCCAGGCAAGTCAGTCAGCCTCAAACCTGCTTGAAGTTGTGTATGGATTTGTATATCGGCTAAACAAGTACTGTCGTGTTCCTGTCTGTTGAAAACATCAGTACGACTTCTCATGGCAATGTTTGTTTGACTACGTTCACAATTGTGCTGTCGTCTGACAATAATTGAGCCGTATACTTAAGCAGTATTGCTGGAATGACCATACGTGTCTAGGTTTGGTGCACCTTTTAACGGTTTCAGATGTTAGACTTGTTCAAACCTCATGGCACCATCGTTTACAATCATCGCACTACATGTTGCTTTTTACGGAGCATCGGCAACTCAAGGTTAGCAACTTCCTTTATTATTATATGCCGTCACCGTTCAAAGATTTTAACATAAAGACTGAGAACGAGCCGTGTCAAAAATTGACAATTAAGAGAGTTAAGCAGAAGCCGACTTGTATGAGAACTGCGAAGTCCTAAATATGTAATAAAAACCCAAAAAAATATCCTGTTCAAATAAAAGAG]


>consensus_5882#0 CATCATTCGGTCTCACCATACCCTCTGTCTATGCCCTCATCGATCCAGAGATCGACACAT GATGAGTTCTAATTCGATTCATGTGTCTAAATATTGAATAAATTGGAAATCCCGTGTTCA AACATCAACCTAATTGGTATTGGACGGATTTTGCCAATTGAATTCGAGAAAACCTGTTTT TTTTTCACACAATCACAAGCCTTTTCTTCTCATTCCCACCTCAGTTTTTTCTAAAGCCGC AATCGGTGTTTCGTTTCATCCAGTTCCTGACTTCAAATGTTTGCTAGAGTTGGATGAATA ATCATCGCCGTTTATTCATCTCTCAGCTAGAAGCATCTAGCTTTTTGATCTGGGTTGTAT GGTATTTCAATGCTTTTTCTGAGAGGATGAGGTATTAAAGACATGGACTTTGACGCTCGA GGCCTTAGGCTTTCGGTTCCACAGGGCCTCTTCAGTAAGTCCTTTATCTCATCAGACCCA GGCAAGTCAGTCAGCCTCAAACCTGCTTGAAGTTGTGTATGGATTTGTATATCGGCTAAA CAAGTACTGTCGTGTTCCTGTCTGTTGAAAACATCAGTACGACTTCTCATGGCAATGTTT GTTTGACTACGTTCACAATTGTGCTGTCGTCTGACAATAATTGAGCCGTATACTTAAGCA GTATTGCTGGGATGACCATACGTGTCTAGGTTTGGTGCACCTTTTAACGGTTTCAGATGT TAGACTTGTTCAAACCTCATGGCACCATCGTTTACAATCATCGCACTACATGTTGCTTTT TACGGAGCATCGGCAACTCAAGGTTAGCAACTTCCTTTATTATTATATGCCGTCACCGTT CAAAGATTTTAACATAAAGACTGAGAACGAGCCGTGTCAAAAATTGACAATTAAGAGAGT TAAGCAGAAGCCGACTTGTATGAGAACTGCGAAGTCCTAAATATGTAATAAAAACCCAAA AAAATATCCTGTTCAAATAAAAGAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)