These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5886#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1114 fasta sequence [AGNATTTCNGCACGAGGGCCCCACATCACCCTGTAGTTCTCTGTGATAAACTCTGAAGATGAATCCAAGCCTCATAAAAGAGAGGGAAGCGTTTTTGAAGAGAGCCATGGCCATTCCTGTTGTCGAGAAACCAAAGTCTAATTATTCTGGTGCTTCAGAGGAAAAAGGTGCTGTGACTTCCGTACACCGCCGTGGACCTCCTTCAGTTTCTGCTGTTTCCGAATTGCGATCTCTCGAACTGAAGCCTCAATTGCAAGGGAAGTTTGCTGTTTTATCTCGAATAGTAAAGTATATGAAGCAACGCCATTTAGAAGGTGATACCCATCCATTATCTGTAGAAGAAATTTTGGAAGAAGCTGTACTTCATGACACACCACCTGCTACCGTAAAATGGCTAGAGGAAGAAGCTCTACCAAATAATCCCAAAATCCGTGTTACCACGGATGCAAAATTCGTATTTAAACCGAGATATGATATTCGTACCCGTAAGGATCTTTACCAACTTCTCCGTCGTCAGGAGTTGAAAGGTTTGGGAGGGATTTATCTAGATGACTTGACTGAATCTGTTCCTGATGTTGAAAAAATTCTCAATAGTTTTGGTGACCATGTGATTCGTATTGTCACACCGCACGATAAGAAAACTATCTTGTTTTAC-AACGACAAATCATTCGATTTGAATGTGGATGAAGAATTTAAGCAACAATGGCGGTCGGTGAGTGTGGAGGGTGTTCATGAGACAAAAATTGAAGAGTATTTAAAGCGTAATGGAATCTCTTCAATGTCTGGTGATCGTAAAAATTTTATACCTGTACAAAGAAAGAAACCAGGACAAAAACGTACCATAAATCGTTCAGTTCATATTAAAGACAATGAACATGTGAACGGAATTTTAGAAGACTTTTTTGAGAAACTAGCCAAAACTTCTTGATCAATTTTAATTTTTATAAGTAACAATGTACAGTGACTTTACATGTATAATAATGTTCACTTATCCTTGATGATTTGTATATTTTGTTCATATTATTGCATCCAAGCATAAACCAGTATTTGTTGGATATTTTTTTGACATGTTTAAGAATAAGGATTTTTTAAATAAAAAAAGATGATAAAATAT] [+] EMBL CD080715 [AGNATTTCNGCACGAGGGCCCCACATCACCCTGTAGTTCTCTGTGATAAACTCTGAAGATGAATCCAAGCCTCATAAAAGAGAGGGAAGCGTTTTTGAAGAGAGCCATGGCCATTCCTGTTGTCGAGAAACCAAAGTCTAATTATTCTGGTGCTTCAGAGGAAAAAGGTGCTGTGACTTCCGTACACCGCCGTGGACCTCCTTCAGTTTCTGCTGTTTCCGAATTGCGATCTCTCGAACTGAAGCCTCAATTGCAAGGGAAGTTTGCTGTTTTATCTCGAATAGTAAAGTATATGAAGCAACGCCATTTAGAAGGTGATACCCATCCATTATCTGTAGAAGAAATTTTGGAAGAAGCTGTACTTCATGACACACCACCTGCTACCGTAAAATGGCTAGAGGAAGAAGCTCTACCAAATAATCCCAAAATCCGTGTTACCACGGATGCAAAATTCGTATTTAAACCGAGATATGATATTCGTACCCGTAAGGATCTTTACCAACTTCTCCGTCGTCAGGAGTTGAAAGGTTTGGGAGGGATTTATCTAGATGACTTGACTGAATCTGTTCCTGATGTTGAAAAAATTCTCAATAGTTNTGGTGACCATGTGATTCGTATTGTCACACCGCACGATAAGAAAACTATCTTGTTTTACAAACGAC AATCATTCGATTTGAATGTGGATGAAGAAATTTAGCAcann ] [-] EMBL CD134981 [ AAATTCGTATTTAAACCGAGATATGATATTCGTACCCGTAAGGATCTTTACCAACTTCCCCGTCGTCAGGAGTTGAAAGGTTTGGGAGGGATTTATCTAGATGACTTGACTGAATCTGTTCCTGATGTTGAAAAAATTCTCAATAGTTTTGGTGACCATGTGATTCGTATTGTCACACCGCACGATAAGAAAACTATCTTGTTTTAC AACGACAAATCATTCGATTTGAATGTGGATGAAGAATTTAAGCAACAATGGCGG ] [-] EMBL CD074640 [ TTTATCTAGATGACTTGACTGAATCTGTTCCTGATGTTGAAAAAATTCTCAATAGTTTTGGTGACCATGTGATTCGTATTGTCACACCGCACGATAAGAAAACTATCTTGTTTTAC AACGACAAATCATTCGATTTGAATGTGGATGAAGAATTTAAGCAACAATGGCGGTCGGTGAGTGTGGAGGGTGTTCATGAGACAAAAATTGAAGAGTATTTAAAGCGTAATGGAATCTCTTCAATGTCTGGTGATCGTAAAAATTTTATACCTGTACAAAGAAAGAAACCAGGACAAAAACGTACCATAAATCGTTCAGTTCATATTAAAGACAATGAACATGTGAACGGAATTTTAGAAGACTTTTTTGAGAAACTAGCCAAAACTTCTTGATCAATTTTAATTTTTATAAGTAACAATGTACAGTGACTTTACATGTATAATAATGTTCACTTATCCTTGATGATTTGTATATTTTGTTCATATTATTGCATCCAAGCATAAACCAGTATTTGTTGGATATTTTTTTGACATGTTTAAGAATAAGGATTTTTTAAATAAAAAAAGATGATAAAATAT] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||