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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5944 cluster # 5944       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5944#0 length = 958 sequences # 3  

consensusID : consensus_5944#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 958
fasta sequence
                              [AGTCAATAATATTTACGATGTGGACAATAAAACATATCTTCTAAAACTAGCCAGCACGAAGTCCGACGACAAGACGATATTGCTTCTAGAATCTGGCTCACGCTTACATATTACTGATTTTGACTGGCCTAAAAACATCATGCCATCAGGATTTTCCATGAAGCTACGTAAACACATACGAAACAAGAAGATCGTTGATATATCCCAAATAGGAGCCGATCGCGTTGTTGATATCCATATTGGTTATGAGTCGTCTGCTTATCATTTGATTGTGGAGTTGTACGATCGAGTAAGTGCGATCTGAATATAGGCTTCCTCGAAAGTAGCCTTGTGACACCATTACACACTTGGTTACTGACAATACG-GGAAATATGCTTCTTACTGATGAATCATTTACGATCCTTCACTTACTGCGTCCTCGAACTGATAAAAATCAGAATATTCGATTTGCAGCCCACGAAAAGTATCCTACAACTTCCTGCCGCCAGATCTTGGAATGTTTTCGCGACCTAAAGGACCAAAAATCTTTAAAGGATATTGAGAATTTCCTCATTCCATTATTCCAATCGTCTAAGGGACCTTGGACATCCAATCCACAAACATGTGACAGCCCTTCCATAAACAAAACGTTATCTTCGGAACTACCTTATGGCAACGTCATCATAGAACACTGCATGCGTGTAGCCCAAAATAAAATCAAACAGATGAGAAATCATAAAGAAGATTTCCAGCTACAATCTGAAAAAACAGACTTGATAGAGTTGTACGTCGAACACTTCGCTGTGGTTTTGAGAGATATTTTACTAGAACCATTCTTATGTGACCGTCAAGCGACTCCACATGGTTATATATTTGGGAAATCCTATCAATCATCGGACGAAGGTTTGCGAAACTATGAAGAATTTCACCCATTCATGTTCGAACAATATCGAGATAAACCTCACTTAGCATTCGATAG]

[+] EMBL CD187762             [AGTCAATAATATTTACGATGTGGACAATAAAACATATCTTCTAAAACTAGCCAGCACGAAGTCCGACGACAAGACGATATTGCTTCTAGAATCTGGCTCACGCTTACATATTACTGATTTTGACTGGCCTAAAAACATCATGCCATCAGGATTTTCCATGAAGCTACGTAAACACATACGAAACAAGAAGATCGTTGATATATCCCAAATAGGAGCCGATCGCGTTGTTGATATCCATATTGGTTATGAGTCGTCTGCTTATCATTTGATTGTGGAGTTGTACGATCGAGTAAGTGCGATCTGAATATAGGCTTCCTCGAAAGTAGCCTTGTGACACCATTACACACTTGGTTACTGACAATACG GGAAATATGCTTCTTACTGATGAATCATTTACGATCCTTCACTTACTGCGTCCTCGAACTGATAAAAATCAGAATATTCGATTTGCAGCCCACGAAAAGTATCCTACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD170659             [                                                                                                                                                                                                                                                                                                                                                                     ACGAT CGAGGAAATATGCTTCTTACTGATGAATCATTTACGATCCTTCACTTACTGTGTCCTCGAACTGATAAAAATCAGAATATTCGATTTGCAGCCCACGAAAAGTATCCTACAACTTCCTGCCGCCAGATCTTGGAATGTTTTCGCGACCTAAAGGACCAAAAATCTTTAAAGGATATTGAGAATTTCCTCATTCCATTATTCCAATCGTCTAAGGGACCTTGGACATCCAATCCACAAACATGTGACAGCCCTTCCATAAACAAAACGTTATCTTCGGAACTACCTTATGGCAACGTCATCATAGAACACTGCATGCGTGTAGCCCAAAATAAAATCAAACAGATGAGAAATCATAAAGAAGATTTCCAGCTACAATCTGAAAAAACAGACTTGATAGAGTTGTACGTCGAACACTTCGCTGTGGTTTTGAGAGATATTTTACTAGAACCATTCTTATGTGACCGTCAAGCGACTCCACATGGTTATATATTTGGGAAATCCTATCAATCATCGGACGAAGGTTTGCGAAACTATGAAGAATTTCACCCATTCATGTTCGAACAATATCGAGATAAACCTCACTTAGCATTCGATAG]
[-] EMBL CD195722             [                                                                                                                                                                                                                                                                                                                                                                                                      TCATTTACGATCCTTCACTTTCTGCGTCCTCGAACTGATAAAAATCAGAATATTCGATTTGCAGCCCCCGAAAAGTATCCTACAACTTCCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]


>consensus_5944#0 AGTCAATAATATTTACGATGTGGACAATAAAACATATCTTCTAAAACTAGCCAGCACGAA GTCCGACGACAAGACGATATTGCTTCTAGAATCTGGCTCACGCTTACATATTACTGATTT TGACTGGCCTAAAAACATCATGCCATCAGGATTTTCCATGAAGCTACGTAAACACATACG AAACAAGAAGATCGTTGATATATCCCAAATAGGAGCCGATCGCGTTGTTGATATCCATAT TGGTTATGAGTCGTCTGCTTATCATTTGATTGTGGAGTTGTACGATCGAGTAAGTGCGAT CTGAATATAGGCTTCCTCGAAAGTAGCCTTGTGACACCATTACACACTTGGTTACTGACA ATACGGGAAATATGCTTCTTACTGATGAATCATTTACGATCCTTCACTTACTGCGTCCTC GAACTGATAAAAATCAGAATATTCGATTTGCAGCCCACGAAAAGTATCCTACAACTTCCT GCCGCCAGATCTTGGAATGTTTTCGCGACCTAAAGGACCAAAAATCTTTAAAGGATATTG AGAATTTCCTCATTCCATTATTCCAATCGTCTAAGGGACCTTGGACATCCAATCCACAAA CATGTGACAGCCCTTCCATAAACAAAACGTTATCTTCGGAACTACCTTATGGCAACGTCA TCATAGAACACTGCATGCGTGTAGCCCAAAATAAAATCAAACAGATGAGAAATCATAAAG AAGATTTCCAGCTACAATCTGAAAAAACAGACTTGATAGAGTTGTACGTCGAACACTTCG CTGTGGTTTTGAGAGATATTTTACTAGAACCATTCTTATGTGACCGTCAAGCGACTCCAC ATGGTTATATATTTGGGAAATCCTATCAATCATCGGACGAAGGTTTGCGAAACTATGAAG AATTTCACCCATTCATGTTCGAACAATATCGAGATAAACCTCACTTAGCATTCGATAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)