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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 5956 cluster # 5956       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5956#0 length = 592 sequences # 3  

consensusID : consensus_5956#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 592
fasta sequence
                              [ATGTACTACAGTTGCCTCGAATGAACCTCAAATAGTTATTGGAAAAGATGCTACGTTTACTTATGATCACGTTCTCAATATGAACGCTTGTCAGGATCATATTTTCCAGACTTTGGCAAAGCCGCTGATTGATGGCTGTATGGATGGATATAACGCAACAATAATAGCCTATGGTCAGACGGGTTCTGGAAAAACATATACTATGGGTACAGGTTTTGATTTCAGCTGCAGCCATACGGATGCTGGGATCATTCCGCGTGCCGTCCAGTATTTATTTGCTAGCGTATCCAAGCGCAGAGCTGAAGCCGCAGCGAAAAATCAACCAGTTCCTGAATTTAAGGTTGTCGCGCAGTTTTTGGAGCTTTACAATGAGGAGTTGGTTGATCTACTCGATTCTGAAAAAATTCAAAAGCCTCATCTAAGATTGCATGAAAACGCACAAGGGGATATATATCTGACCGGTGTATCTACTAGACTTGTATCAAGTTTGGATGACACCCTAAAATGTCTTCGTGATGGCTCACTAATCAGAAGTACAGCCAGTACCAATATGAATACTCAATCATCTCGTTCCCACGCCATATTTACATTG]

[+] EMBL CD094439             [ATGTACTACAGTTGCCTCGAATGAACCTCAAATAGTTATTGGAAAAGATGCTACGTTTACTTATGATCACGTTCTCAATATGAACGCTTGTCAGGATCATATTTTCCAGACTTTGGCAAAGCCGCTGATTGATGGCTGTATGGATGGATATAACGCAACAATAATAGCCTATGGTCAGACGGGTTCTGGAAAAACATATACTATGGGTACAGGTTTTGATTTCAGCTGCAGCCATACGGATGCTGGGATCATTCCGCGTGCCGTCCAGTATTTATTTGCTAGCGTATCCAAGCGCAGAGCTGAAGCCGCAGCGAAAAATCAACCAGTTCCTGAATTTAAGGTTGTCGCGCAGTTTTTGGAGCTTTACAATGAGGAGTTGGTTGATCTACTCGATTCTGAAAAAATTCAAAAGCCTCATCTAAGATTGCATGAAAACGCACAAGGGGATATATATCTGACCGGTGTATCTACTAGACTTGTATCAAGTTTGGATGACACCCTAAAATGTCTTCGTGATG                                                                          ]
[-] EMBL CD161383             [                                                                                                                                                                                                                             TCAGCTGCAGCCATACGGATGCTGGGATCATTCCGCGTGCCGTCCAGTATTTATTTGCTAGCGTATCCAAGCGCAGAGCTGAAGCCGCAGCGAAAAATCAACCAGTTCCTGAATTTAAGGTTGTCGCGCAGTTTTTGGAGCTTTACAATGAGGAGTTGGTTGATCTACTCGATTCTGAAAAAATTCAAAAGCCTCATCTAAGATTGCATGAAAACGCACAAGGGGATATATATCTGACCGGTGTATCTACTAGACTTGTATCAAGTTTGGATGACACCCTAAAATGTCTTCGTGATGGCTCACTAATCAGAAGTACAGCCAGTACCAATATGAATACTCAATCATCTCGTTCCCACGCCATATTTACATTG]
[+] EMBL CD191002             [                                                                                                                                                                                                                                  TGCAGCCATACGGATGCTGGGATCATTCCGCGTGCCGTCCAGTATTTATTTGCTAGCGTATCCAAGCGCAGAGCTGAAGCCGCAGCGAAAAATCAACCAGTTCCTGAATTTAAGGTTGTCGCGCAGTTTTTGGAGCTTTACAATGAGGAGTTGGTTGATCTACTCGATTCTGAAAAAATTCAAAAGCCTCATCTAAGATTGCATGAAAACGCACAAGGGGATATATATCTGACCGGTGTATCTACTAG                                                                                                                      ]


>consensus_5956#0 ATGTACTACAGTTGCCTCGAATGAACCTCAAATAGTTATTGGAAAAGATGCTACGTTTAC TTATGATCACGTTCTCAATATGAACGCTTGTCAGGATCATATTTTCCAGACTTTGGCAAA GCCGCTGATTGATGGCTGTATGGATGGATATAACGCAACAATAATAGCCTATGGTCAGAC GGGTTCTGGAAAAACATATACTATGGGTACAGGTTTTGATTTCAGCTGCAGCCATACGGA TGCTGGGATCATTCCGCGTGCCGTCCAGTATTTATTTGCTAGCGTATCCAAGCGCAGAGC TGAAGCCGCAGCGAAAAATCAACCAGTTCCTGAATTTAAGGTTGTCGCGCAGTTTTTGGA GCTTTACAATGAGGAGTTGGTTGATCTACTCGATTCTGAAAAAATTCAAAAGCCTCATCT AAGATTGCATGAAAACGCACAAGGGGATATATATCTGACCGGTGTATCTACTAGACTTGT ATCAAGTTTGGATGACACCCTAAAATGTCTTCGTGATGGCTCACTAATCAGAAGTACAGC CAGTACCAATATGAATACTCAATCATCTCGTTCCCACGCCATATTTACATTG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)