cluster # 5980

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Schistosoma mansoni
cluster # 5980 cluster # 5980 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5980#0 length = 843 sequences # 3

consensusID : consensus_5980#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 843
fasta sequence

                              [GTGGTGTGCAGAATACTCGCCGCAGACGTCGTTCTTTGGTTACTGGCACGAATTTGTCACATGCCGAATCTGACATTCAGAGTAAAGGAGGAGTCAAAGATATGAATAGTTTGAATCCTAATTATGAGTCAAATGAAGCGAAACGCTTAGTGCAAGATATTTTAGCGGTACGTGCTGAGCAAGAAGATTCCGGTTTTGTTAGATTTCCTTTGACCATCACATCAGTGTTGGATATTACAGGTTGGCGAGTTCTTCATTGTGCTGACAATTTAGATTTATTGGCATACACAGAGTTGCAAACATTAGAAACTATAAAAAATATGGAGACCGATTTAGCCGACCAGCTTCATTGCATTTCTACTCAGAGTGTTACATCATCACATCTTAGTGTATCTCAAGGTGTCAGTGAAACAGTGAAATCTGTAGAGTCTGGATTAAAATCAGATGAATCCGAGATGGCTAG-TCAGTTTAATATAGCTATTGAATTAATCAA-AGGCATTTCTCAACGTAAGAAAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTTCAGTCCTGGAATTCACAATCTAATTGAAGAGCTATAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATACTTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTTCCGATCCATAATCCTATAGTCCGACAAGTTCGACGTCCAAATAACGTTGCAATCACTAGATGCTCAAAATCACTAACTTCCTTAATTTAAAATTCACCAAATAGCTATCCAGGAACGAGT]

[+] EMBL CD128050             [GTGGTGTGCAGAATACTCGCCGCAGACGTCGTTCTTTGGTTACTGGCACGAATTTGTCACATGCCGAATCTGACATTCAGAGTAAAGGAGGAGTCAAAGATATGAATAGTTTGAATCCTAATTATGAGTCAAATGAAGCGAAACGCTTAGTGCAAGATATTTTAGCGGTACGTGCTGAGCAAGAAGATTCCGGTTTTGTTAGATTTCCTTTGACCATCACATCAGTGTTGGATATTACAGGTTGGCGAGTTCTTCATTGTGCTGACAATTTAGATTTATTGGCATACACAGAGTTGCAAACATTAGAAACTATAAAAAATATGGAGACCGATTTAGCCGACCAGCTTCATTGCATTTCTACTCAGAGTGTTACATCATCACATCTTAGTGTATCTCAAGGTGTCAGTGAAACAGTGAAATCTGTAGAGTCTGGATTAAAATCAGATGAATCCGAGATGGCTAG TCAGTTTAATATAGCTGTTGAATTAATCAA AGGCATTTCTCAA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD083388             [                                                                                                                                                                                                                                                                                                                                                                                                                         AACAGTGAAATCTGTAGAGTCTGGATT AAATCAGATGAATCCGAGATGGCTAGCTCAGTTTAATATAGCTATTGAATTAATCAA AGGCATTTCTCAACGTAAGAAAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTTCAGTCCTGGAATTCACAATCTAATTGAAGAGCTATAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATACTTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTTCCGATCCATAATCCTATAGTCCGACAAGTTCGACGTCCAAATAACGTTGCAATCACTAGATGCTCAAAATCACTAACTTCCTTAATTTAAAATTCACCAAATAGCTATCCAGGAACGAGT]
[+] EMBL CD083427             [                                                                                                                                                                                                                                                                                                                                                                                                                        cAACAGTGAAATCTGTAGAGTCT GATTAAAATCAGATGAATCCGAGATGGCTAG TCAGTTTAATATAGCTATTGAATTAATCAACAGGCATTTCTCAACGTAAAACAATACCTACTGGACTCTATTCAGCGGATAAGTTCCGTCACCAAAAATTTAGTACATCATTACAGTCCTGGAATACACAATCTATTTGAAGAGCTAGAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAAACCAATTTGGATTCCAATAATTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGGTTACCGACCCATAATCCTATAGTCCGACAAGTTCGACGTCGAAGTAACGTTGCAATCAC                                                                ]




>consensus_5980#0
GTGGTGTGCAGAATACTCGCCGCAGACGTCGTTCTTTGGTTACTGGCACGAATTTGTCAC
ATGCCGAATCTGACATTCAGAGTAAAGGAGGAGTCAAAGATATGAATAGTTTGAATCCTA
ATTATGAGTCAAATGAAGCGAAACGCTTAGTGCAAGATATTTTAGCGGTACGTGCTGAGC
AAGAAGATTCCGGTTTTGTTAGATTTCCTTTGACCATCACATCAGTGTTGGATATTACAG
GTTGGCGAGTTCTTCATTGTGCTGACAATTTAGATTTATTGGCATACACAGAGTTGCAAA
CATTAGAAACTATAAAAAATATGGAGACCGATTTAGCCGACCAGCTTCATTGCATTTCTA
CTCAGAGTGTTACATCATCACATCTTAGTGTATCTCAAGGTGTCAGTGAAACAGTGAAAT
CTGTAGAGTCTGGATTAAAATCAGATGAATCCGAGATGGCTAGTCAGTTTAATATAGCTA
TTGAATTAATCAAAGGCATTTCTCAACGTAAGAAAATACCTACTGGACTCTATTCAGCGG
ATAAGTTCCGTCACCAAAAATTTAGTACATCATTTCAGTCCTGGAATTCACAATCTAATT
GAAGAGCTATAAGACAGTTCCAACAATTCTAGTAAATCATTGTCTCCGTCATCGTCGAAA
ACCAATTTGGATTCCAATACTTCATCTACTCCAGTTACCTTACGGAGATCTTCACGAAGG
TTTCCGATCCATAATCCTATAGTCCGACAAGTTCGACGTCCAAATAACGTTGCAATCACT
AGATGCTCAAAATCACTAACTTCCTTAATTTAAAATTCACCAAATAGCTATCCAGGAACG
AGT

clustalw multiple alignements is not computed in this case