Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6020 cluster # 6020       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6020#0 length = 841 sequences # 4  

consensusID : consensus_6020#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 841
fasta sequence
                              [GTTGAAACGAAAAATGCTCTCAATGTTGTGAAAGACGATCTACTAGCTAGAATTGACCATTTGACATCTGAAAATATATCATTACATGAATCAGTGAATATGTTAACTGATTCACGAATTCGTTTACAAAGTGAATTAACTAATATTGATCAAATGTTAAATGATGCACGTACAGAAATTAATCAATTAAATGAAAAACTTTCATTTTATCAAGATAAAACAAATATAGAGTCAACTAATTCTGCACAAGTTAAACGTTTCACACGATCTGAAATGGCACGTATTCTAGCTGAACGTAATCATTATAAAGAACGTTTATTAGAATTACAAGATGCTGTACGTTTTACAGAAACTTTACGTGTCAGTCAAAAAGGACATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGTAAATTTGATTTAAATAGTCCAGTTAGTGGTCCATTACAAAGTCTATAAAAGTTCTTCTCTTCATTTACTTCTGGTCAACGTTCTGAAAATTCAAATGAATTAATTCAAAATGCTGGAAATGATTTGTCAATTCATGGTACGGATAATTCTCTATCATGGATTACATTGTCAGCAACATGTACCAATTCTCCAATTTATGGTTGGGCAACTGGAAAACCATCTGATCGAAAATCCAGTTGTAATAATAATAATGGTGGTGCTTTGCAAAGTAACAATCATTCTGTTGATGATAATGTATATTCTAATGTACCAGTTCCTATTCAATGTAGAACAATTGGTGGTTTACATAAGAAAAACTTAGAGATATGTACAGCACTTACTGTTCCAATTGCATCCTTGGACTGTGATTCTAAACCTAAAT]

[-] EMBL CD189096             [GTTGAAACGAAAAATGCTCTCAATGTTGTGAAAGACGATCTACTAGCTAGAATTGACCATTTGACATCTGAAAATATATCATTACATGAATCAGTGAATATGTTAACTGATTCACGAATTCGTTTACAAAGTGAATTAACTAATATTGATCAAATGTTAAATGATGCACGTACAGAAATTAATCAATTAAATGAAAAACTTTCATTTTATCAAGATAAAACAAATATAGAGTCAACTAATTCTGCACAAGTTAAACGTTTCACACGATCTGAAATGGCACGTATTCTAGCTGAACGTAATCATTATAAAGAACG TTATTAGAATTACAAGATGCTGTACGTTTTACAGAAACTTTACGTGTCAGTCAAAAAGGACATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGTAAATTTGATTTAAATAGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD188645             [                                                                                                                                                  TGATCAAATGTTAAATGATGCACGTACAGAAATTAATCAATTAAATGAAAAACTTTCATTTTATCAAGATAAAACAAATATAGAGTCAACTAATTCTGCACAAGTTAAACGTTTCACACGATCTGAAATGGCACGTATTCTAGCTGAACGTAATCATTATAAAGAACGTTTATTAGAATTACAAGATGCTGTACGTTTTACAGAAACTTTACGTGTCAGTCAAAAAGGACATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGTAAATTTGATTTAAATAGTCCA                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CD118715             [                                                                                                                                                                                                                                                                                                             ATTATAAAGAACGTTTATTAGAATTACAAGATGCTGTACGTTTTACAGAAACTTTACGTGTCAGTCAAAAAGGACATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGTAAATTTGATTTAAATAGTCCAGTTAGTGGTCCATTACAAAGTCTATAAAAGTTCTTCTCTTCATTTACTTCTGGTCAACGTTCTGAAAATTCAAATGAATTAATTCAAAATGCTGGAAATGATTTGTCAATTCATGGTACGGATAATTCTCTATCATGGATTACATTGTCAGCAACATGTACCAATTCTCCAATTTATGGTTGGGCAACTGGAAAACCATCTGATCGAAAATCCAGTTGTAATAATAATAATGGTGGTGCTTTGCAAAGTAACAATCATTCTGTTGATGATAATGTATATTCTAATGTACCAGTTCCTATTCAATGTAGAACAATTGGTGGTTTACATAAGAAAAACTTAGAGATATGTACAGCACTTACTGTTCCAATTGCATCCTTGGACTGTGATTCTAAACCTAAAT]
[-] EMBL CD123606             [                                                                                                                                                                                                                                                                                                                                                                                        ATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGTAAATTTGATTTAAATAGTCCCGTTAGTGGTCCATTACAAAGTCTACAAAAGTTCTTCTCTTCATTTACTTCTGGTCAACGTTCTGAAAATTCAAATGAATTAATTCAAAATGCTGGAAATGATTTGTCAATTCATGGTACGGATAATTCTCTATCATGGATTACATTGTCAGCAACATGTACCAATTCTCCAATTTATGGTTGGGCAACTGGAAAACCATCTGATCGAAAATCCAGTTGTAATAATAATAATGG                                                                                                                                                                       ]


>consensus_6020#0 GTTGAAACGAAAAATGCTCTCAATGTTGTGAAAGACGATCTACTAGCTAGAATTGACCAT TTGACATCTGAAAATATATCATTACATGAATCAGTGAATATGTTAACTGATTCACGAATT CGTTTACAAAGTGAATTAACTAATATTGATCAAATGTTAAATGATGCACGTACAGAAATT AATCAATTAAATGAAAAACTTTCATTTTATCAAGATAAAACAAATATAGAGTCAACTAAT TCTGCACAAGTTAAACGTTTCACACGATCTGAAATGGCACGTATTCTAGCTGAACGTAAT CATTATAAAGAACGTTTATTAGAATTACAAGATGCTGTACGTTTTACAGAAACTTTACGT GTCAGTCAAAAAGGACATCGTGAATTATTTATGACTAAAACACCAACAATACAACAATGT AAATTTGATTTAAATAGTCCAGTTAGTGGTCCATTACAAAGTCTATAAAAGTTCTTCTCT TCATTTACTTCTGGTCAACGTTCTGAAAATTCAAATGAATTAATTCAAAATGCTGGAAAT GATTTGTCAATTCATGGTACGGATAATTCTCTATCATGGATTACATTGTCAGCAACATGT ACCAATTCTCCAATTTATGGTTGGGCAACTGGAAAACCATCTGATCGAAAATCCAGTTGT AATAATAATAATGGTGGTGCTTTGCAAAGTAACAATCATTCTGTTGATGATAATGTATAT TCTAATGTACCAGTTCCTATTCAATGTAGAACAATTGGTGGTTTACATAAGAAAAACTTA GAGATATGTACAGCACTTACTGTTCCAATTGCATCCTTGGACTGTGATTCTAAACCTAAA T



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)