cluster # 6024

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Schistosoma mansoni
cluster # 6024 cluster # 6024 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6024#0 length = 345 sequences # 4

consensusID : consensus_6024#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 345
fasta sequence

                              [AGGNCTACAAAATGGAGNAAGCAACTTCCAACTA-GGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG-CTTACC]

[+] EMBL CD063275             [AGGNCTACAAAATGGAGNAAGCAACTTCCAACTAGGGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCTGATGCTAACCATGTAGGAGG CTTAC ]
[+] EMBL CD126192             [                       ACTT CAACTA GGT CAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG CTTAC ]
[+] EMBL CD126260             [                          ttCAACTA GGT CAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTATAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGG CTTAC ]
[-] EMBL CD062963             [                             AACTA GGTCCAGCTCGTTCTTCTCAGGTGTTGTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCCACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTACAAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTGGTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAACAAGACGAAGACGATCATCAGGTGCTAACCATGTAGGAGGACTTACC]




>consensus_6024#0
AGGNCTACAAAATGGAGNAAGCAACTTCCAACTAGGTCCAGCTCGTTCTTCTCAGGTGTT
GTTTGCTTTTGATCCACGATTTGTAAATTCACGCATAGCAATAACTAACGTGGACTTTCC
ACACGGACCAAACTCTCACAAATTGTCTTCCAACTGGGTCCCAGGAATACAAGCTACTAT
AAGTTTGGTAAAACTTCCAACATGGGAGTGTTTAACATCAACTAACAAACTTTGTTCTTG
GTCTCCTTCAAATCGCCACGGTTCACCTCTTATAAACAATACTACTTGTAGAGAACCAAC
AAGACGAAGACGATCATCAGATGCTAACCATGTAGGAGGCTTACC

clustalw multiple alignements is not computed in this case