cluster # 6043

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Schistosoma mansoni
cluster # 6043 cluster # 6043 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6043#0 length = 531 sequences # 4

consensusID : consensus_6043#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 531
fasta sequence

                              [AAAAATTATTTAATTTTATAAATGACCTTTTTGTTTACACTGGACGATTATTGTTATTATTTTAAAAGGATAATATTCAAAAGAATATTTAAACATAGTCATCAAGATAGTAAGAACAATAGTAGTAATAATGATAATAGGTAATAAGT-AAC-TTTTTATTGCTCT-AAAACG-AT-AAAATAATGAATAGCCTACAAATGAATACACAAACAGAACAAATTTATTCACACAGGAAATGTTCCCAGAATAAACCAGAAACAAGTGAAAATAAACAAATAAAAAAGTAAACAGAGTTATATGTTTCAGTACATTTGAAAAGAATACGAGAAAATTGATAACAGTACAAACGATAATCACCACCACAACAACAATTAAGTAATCAGCTAACCAATCACTATCATGAATACAAAAAAATTGATGGCAATTACAATCGTATTAGTGATGGACAGGGGAACAGGATGTTCCATATTGTTTGAATCTGGATTAGAAGTTTTCATCCGAAAAGAATATAATACAATATTCACATAAAAAGAA]

[+] EMBL CD077256             [AAAAATTATTTAATTTTATAAATGACCTTTTTGTTTACACTGGACGATTATTGTTATTATTTTAAAAGGATAATATTCAAAAGAATATTTAAACATAGTCATCAAGATAGTAAGAACAATAGTAGTAATAATGATAATAGGTAATAAGT AAC TTTTTATTGCTCT AAAACG AT AAAATAATGAATAGCCTACAAATGAATACACAAACAGAACAAATTTATTCACACAGGAAATGTTCCCAGAATAAACCAGAAACAAGTGAAAATAAACAAATAAAAAAGTAAACAGAGTTATATGTTTCAGTACATTTGAAAAGAATACGAGAAAATTGATAACAGTACAAACGATAATCACCACCACAACAACAATTAAGTAATCAGCTAACCAATCACTATCATGAATACAAAAAAATTGATGGCAATTACAATCGTATTAGTGATGGACAGGGGAACAGGATGTTCCATATTGTTTGAATCTGGATTAGAAGTTTTCATCCGAAAAGAATATAATACAATATTCACATAAAAAGAA]
[+] EMBL AA952860             [                                             GATTATTGTTATTATTTTAAAAGGATAATATTCAAAAGAATATTTAAACATAGTCATCAAGATAGTAAGAACAATAGTAGTAATAATGATAATAGGTAATAAGTAAACTTTTTTATTGCTCT AAAAAGCATAAAAATAATGAATAGCCTACAA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL SMAA98623            [                                             GATTATTGTTATTATTTTAAAAGGATAATATTCAAAAGAATATTTAAACATAGTCATCAAGATAGTAAGAACAATAGTAGTAATAATGATAATAGGTAATAAGTAAACTTTTTTATTGCTCTAAAAACG ATAAAAATAATGAATAGCCTACAA                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CD063040             [                                                                                                                                                                                                                     AGAACAAATTTATTCACACAGGAAATGTTCCCAGAATAAACCAGAAACAAGTGAAAATAAACAAATAAAAAAGTAAACAGAGTTATATGTTTCAGTACATTTGAAAAGAATACGAGAAAATTGATAACAGTACAAACGATAATCACCACCACAACAACAATTAAGTAATCAGCTAACCAATCACTATCATGAATACAAA                                                                                                                            ]




>consensus_6043#0
AAAAATTATTTAATTTTATAAATGACCTTTTTGTTTACACTGGACGATTATTGTTATTAT
TTTAAAAGGATAATATTCAAAAGAATATTTAAACATAGTCATCAAGATAGTAAGAACAAT
AGTAGTAATAATGATAATAGGTAATAAGTAACTTTTTATTGCTCTAAAACGATAAAATAA
TGAATAGCCTACAAATGAATACACAAACAGAACAAATTTATTCACACAGGAAATGTTCCC
AGAATAAACCAGAAACAAGTGAAAATAAACAAATAAAAAAGTAAACAGAGTTATATGTTT
CAGTACATTTGAAAAGAATACGAGAAAATTGATAACAGTACAAACGATAATCACCACCAC
AACAACAATTAAGTAATCAGCTAACCAATCACTATCATGAATACAAAAAAATTGATGGCA
ATTACAATCGTATTAGTGATGGACAGGGGAACAGGATGTTCCATATTGTTTGAATCTGGA
TTAGAAGTTTTCATCCGAAAAGAATATAATACAATATTCACATAAAAAGAA

clustalw multiple alignements is not computed in this case