cluster # 6052

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Schistosoma mansoni
cluster # 6052 cluster # 6052 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6052#0 length = 777 sequences # 4

consensusID : consensus_6052#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 777
fasta sequence

                              [GTGAAATTTTCATGAATATAAAGCAAGAAGGAAATATATCACAATCCCAATAGCGGTAAAAATAAAAGGGATGAGTCAATAGGAAACAGCAACAAAACTGTACTGAAACATTAGTAC-AACTTGAAGAAATCATCTTAATCGA-CAAATTAATTATTGATTGATAAATAGAAGTAAAAAAAAAAGAAAACTTTGGATGATAAATGTCAAGCGTGATTACATAATTATCTGTATGTGGGGGGTAATCTACTAAATATTATCGATCGCTTTTTATAAATAAAAAAAGAACATCAGAGGCTAACCTCTCAAGACTAAAGTGAGTTTCCAAAAAAAAAAACGAAATTGGATTTGCAAGTTAAATGACGATAATGAGACAATAAACTGTCCATTTAAGTGTGCACTTCTTTATATGCGATGACGTGTCAGTGGATTCAAGTCTTTATACACTATAAAAGTAATTTATAAAACTAAGATGGGCGTCAACAATTCAAGTAACAAGTAAACTGTAATTGTTATTAGATGAGAAATTTATTTTACACATTAACCATTGAATAGTTATTTATTGTCTGTAGACAAACATCTAAATAAAGAATAAATCATAAACTGGATATTTTCTGATTTCAGCTGGATTATCACTGTTCTTATTATTGAAGTTCAGTTTCTTATGGANCTGCTTGGAATAATAGTACTGCATTTAAGTACAGATGAAAATAAATAAAGCTGTTTTCTGTATGTGAAACGTAACAACCAGAACGTTTTCCAACTATACATTGCCATCGT]

[-] EMBL SMAA28946            [GTGAAATTTTCATGAATATAAAGCAAGAAGGAAATATATCACAATCCCAATAGCGGTAAAAATAAAAGGGATGAGTCAATAGGAAACAGCAACAAAACTGTACTGAAACATTAGTACAAACTTGAAGAAATCATCTTAATCGACCAAATTAATTATTGATTGATAAATAGAAGTAAAAAAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AW017289             [                                                                                                          AACATTAGTAC AACTTGAAGAAATCATCTTAATCGA CAAATTAATTATTGATTGATAAATAGAAGTAATAAAAAAAGAAAACTTTGGATGATAAATGTCAAGCGTGATTACATAATTATCTGTATGTGGGGGGTAATCTACTAAATATTATCGATCGCTTTTTATAAATAAAAAAAGAACATCAGAGGCTAACCTCTCAAGACTAAAGTGAGTTTCCAAAAAAAAAAACGAAATTGGATTTGCAAGTTAAATGACGATAATGAGACAATAAACTGTCCATTTAAGTGTGCACTTCTTTATATGCGATGACGTGTCAGTGGATTCAAGTCTTTATACACTATAAAAGTAATTTATAAAACTAAGATGGGCGTCAACAATTCAAGTAACAAGTAAACTGTAATTGTTATTAGATGAGAAATTTATTTTACACATTAACCATTGAATAGTTATTTATTGTCTGTAGACAAACATCTAAATAAAGAATAAATCATAAACTGGATATTTTCTGATTTCAGCTGGATTATC                                                                                                                                                  ]
[-] EMBL CD195656             [                                                                                                                                                                                                                                                                                                                   AGACTAAAGTGAGTTTCC AAAAAAAAAACGAAATTGGATTTGCAAGTTAAATGACGATAATGAGACAATAAACTGTCCATTTAAGTGTGCACTTCTTTATATGCGATGACGTGTCAGTGGATTCAAGTCTTTATACACTATAAAAGTAATTTATAAAACTAAGATGGGCGTCAACAATTCAAGTAACAAGTAAACTGTAATTGTTATTAGATGAGA                                                                                                                                                                                                                                                               ]
[-] EMBL CD129929             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTCAAGTAACAAGTAAACTGTAATTGTTATTAGATGAGAAATTTATTTTACACATTAACCATTGAATAGTTATTTATTGTCTGTAGACAAACATCTAAATAAAGAATAAATCATAAACTGGATATTTTCTGATTTCAGCTGGATTATCACTGTTCTTATTATTGAAGTTCAGTTTCTTATGGANCTGCTTGGAATAATAGTACTGCATTTAAGTACAGATGAAAATAAATAAAGCTGTTTTCTGTATGTGAAACGTAACAACCAGAACGTTTTCCAACTATACATTGCCATCGT]




>consensus_6052#0
GTGAAATTTTCATGAATATAAAGCAAGAAGGAAATATATCACAATCCCAATAGCGGTAAA
AATAAAAGGGATGAGTCAATAGGAAACAGCAACAAAACTGTACTGAAACATTAGTACAAC
TTGAAGAAATCATCTTAATCGACAAATTAATTATTGATTGATAAATAGAAGTAAAAAAAA
AAGAAAACTTTGGATGATAAATGTCAAGCGTGATTACATAATTATCTGTATGTGGGGGGT
AATCTACTAAATATTATCGATCGCTTTTTATAAATAAAAAAAGAACATCAGAGGCTAACC
TCTCAAGACTAAAGTGAGTTTCCAAAAAAAAAAACGAAATTGGATTTGCAAGTTAAATGA
CGATAATGAGACAATAAACTGTCCATTTAAGTGTGCACTTCTTTATATGCGATGACGTGT
CAGTGGATTCAAGTCTTTATACACTATAAAAGTAATTTATAAAACTAAGATGGGCGTCAA
CAATTCAAGTAACAAGTAAACTGTAATTGTTATTAGATGAGAAATTTATTTTACACATTA
ACCATTGAATAGTTATTTATTGTCTGTAGACAAACATCTAAATAAAGAATAAATCATAAA
CTGGATATTTTCTGATTTCAGCTGGATTATCACTGTTCTTATTATTGAAGTTCAGTTTCT
TATGGANCTGCTTGGAATAATAGTACTGCATTTAAGTACAGATGAAAATAAATAAAGCTG
TTTTCTGTATGTGAAACGTAACAACCAGAACGTTTTCCAACTATACATTGCCATCGT

clustalw multiple alignements is not computed in this case