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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6054 cluster # 6054       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6054#0 length = 994 sequences # 4  

consensusID : consensus_6054#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 994
fasta sequence
                              [ATGACTATAGAAGAAAAAAAATCTTTAGTACAAAAATTAGGATTGAGTTGACAAATAAGTCAGTAGATTATTCAACAAATATAGAATTGTTTAAGAAACCTGATGATATTGGTTTGTTTTGTTCCATTCTTTAGGTAGGACATCTGTAGTATAAACACATCATAATGCACATTTTGCGAAATTTTGACTTAAAGACAAAATATGGCGCAGTAACAGATTTATTTTTACAGCCAAGCGTTGTAAAACATAGCAAGTTAGGGAACAGGTTAAGTAGGAAGATTAGTAATCTGGATCAGATGGTTCAGATTCGTCTGCTGAATCACTTTCTTCCCCACTAGAACTGGCCGCCATTATGCATCGTTTTCGACGTTTGCGCTTATTCTTGGTATTTCGAGCTAGAGGATTTTTCAAATTACCACGTAGATTGAGGGCTGGTTTCCGTTTCTTTGTAGGAGCTGATTGTGCCAACATAAGTCGAGAAGCACCACCTGCATTTGAATCTTCTGAATCATTGTCATCTTCCGAAGATTTACTGTGCAATTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTA-TCTGAAACTGTATTTAATCGATCATCATTAGTAGGCCCACCGGACTGTACTGAAGTATTCAAGTCATCAGGTCCCAGTTCTTCTTCTCCCGGAGGATCAATGGTAAGAATTAACTTTCGGAAGTCTAAGTAATCTCGGATGAGAGATTGCATTTCATTTATCATTTCTTCTCCACTATCTGCTTGCTTGTCATTAGGATTGGATAACTCCACACTACTATTATCTGTTCTAACTGATGATTGAGAATTGCATAGGATATGAGAATCAGATTTATTAATCTCCATTCCGGCAGCTTTTAAACAAGGTATTGGATGAAAATGAACACCGACACGTCGTGTTAACGGCTTCTCCCATAATTTGGCTGAATCAGAAGGTGAGTAACGTTGGATTTTACCGTCAGTGATG]

[+] EMBL CD169100             [ATGACTATAGAAGAAAAAAAATCTTTAGTACAAAAATTAGGATTGAGTTGACAAATAAGTCAGTAGATTATTCAACAAATATAGAATTGTTTAAGAAACCTGATGATATTGGTTTGTTTTGTTCCATTCTTTAGGTAGGACATCTGTAGTATAAACACATCATAATGCACATTTTGCGAAATTTTGACTTAAAGACAAAATATGGCGCAGTAACAGATTTATTTTTACAGCCAAGCGTTGTAAAACATAGCAAGTTAGGGAACAGGTTAAGTAGGAAGATTAGTAATCTGGATCAGATGGTTCAGATTCGTCTGCTGAATCACTTTCTTCCCCACTAGAACTGGCCGCCATTATGCATCGTTTTCGACGTTTGCGCTTATTCTTGGTATTTCGAGCTAGAGGATTTTTCAAATTACCACGTAGATTGAGGGCTGGTTTCCGTTTCTTTGTAGGAGCTGATTGTGCCAACATAAGTCGAGAAGCACCACCTGCATTTGAATCTTCTGAATCATTGTCATCTTCCGAAGATTTACTGTGCAATTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTA TCTGAAACTGTATTTAATCGATCATCATTAGTAG                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD119244             [                                                                                                                                                                          ATTTTGCGAAATTTTGACTTAAAGACAAAATATGGCGCAGTAACAGATTTATTTTTACAGCCAAGCGTTGTAAAACATAGTAAGTTAGGGAACAGGTTAAGTAGGAAGATTAGTAATCTGGATCAGATGGTTCAGATTCGTCTGCTGAATCACTTTCTTCCCCACTAGAACTGGCCGCCATTATGCATCGTTTTCGACGTTTGCGCTTATTCTTGGTATTTCGAGCTAGAGGATTTTTCAAATTACCACGTAGATTGAGGGCTGGTTTCCGTTTCTTTGTAGGAGCTGATTGTGCCAACATAAGTCGAGAAGCACCACCTGCATTTGAATCTTCTGAATCATTGTCATCTTCCGAAGATTTACTGTGCAATTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTA TCTGAAACTGTATTTAATCGATCATCATTAGTAGGCCCACCGGACTG                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CD169710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGAGCTGATTGTGCCAACATAAGTCGAGAAGCCCCACCTGCAATTGAATCTTCTGAATCATTGTCATCTTCCGAAGATTTACTGTGCAATTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTA TCTGAAACTGTATTTAATCGATCATCATTAGTAGGCCCACCGGACTGTACTGAAGTATTCAAGTCATCAGGTCCCAGTTCTTCTTCTCCCGGAGGATCAATGGTAAGAATTAACTTTCGGAAGTCTAAGTAATCTCGGATGAGAGATTGCATTTCATTTATCATTTCTTCTCCACTATCTGCTTGCTTGTCATTAGGATTGGATAACTCCACACTACTATTATCTGTTCTAACTGATGATTGAGAATTGCATAGGATATGAGAATCAGATTTATTAATCTCCATTCCGGCAGCTTTTAAACAAGGTATTGGATGAAAATGAACACCGACACGTCGTGTTAACGGCTTCTCCCATAATTTGGCTGAATCAGAAGGTGAGTAACGTTGGATTTTACCGTCAGTGATG]
[-] EMBL CD089834             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGATTTACTGTGCAATTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTATTCTGAAACTGTATGTAATCGATCATCATTAGTAGGCCCACCGGACTGTACTGAAGTATTCAAGTCATCAGGTCCCAGTTCTTCTTCTCCCGGAGGATCAATGGTAAGAATTAACTTTCGGAAGTCTAAGTAATCTCGGATGAGAGATTGCATTTCATTTATCATTTCTTCTCCACTATCTGCTTGCTTGTCATTAGGATTGGATAACTCCACACTACTATTATCTGTTCTAACTGATGATTGAGAATTGCATAGGATATGAGAATCAGATTTATTAATCTCCATTCCGGCAGCTTTTAAACAAG                                                                                                     ]


>consensus_6054#0 ATGACTATAGAAGAAAAAAAATCTTTAGTACAAAAATTAGGATTGAGTTGACAAATAAGT CAGTAGATTATTCAACAAATATAGAATTGTTTAAGAAACCTGATGATATTGGTTTGTTTT GTTCCATTCTTTAGGTAGGACATCTGTAGTATAAACACATCATAATGCACATTTTGCGAA ATTTTGACTTAAAGACAAAATATGGCGCAGTAACAGATTTATTTTTACAGCCAAGCGTTG TAAAACATAGCAAGTTAGGGAACAGGTTAAGTAGGAAGATTAGTAATCTGGATCAGATGG TTCAGATTCGTCTGCTGAATCACTTTCTTCCCCACTAGAACTGGCCGCCATTATGCATCG TTTTCGACGTTTGCGCTTATTCTTGGTATTTCGAGCTAGAGGATTTTTCAAATTACCACG TAGATTGAGGGCTGGTTTCCGTTTCTTTGTAGGAGCTGATTGTGCCAACATAAGTCGAGA AGCACCACCTGCATTTGAATCTTCTGAATCATTGTCATCTTCCGAAGATTTACTGTGCAA TTGTGGTACTAACGTTCTTACGGATCGACCTTTACTCAACTGTGTACTATCTGAAACTGT ATTTAATCGATCATCATTAGTAGGCCCACCGGACTGTACTGAAGTATTCAAGTCATCAGG TCCCAGTTCTTCTTCTCCCGGAGGATCAATGGTAAGAATTAACTTTCGGAAGTCTAAGTA ATCTCGGATGAGAGATTGCATTTCATTTATCATTTCTTCTCCACTATCTGCTTGCTTGTC ATTAGGATTGGATAACTCCACACTACTATTATCTGTTCTAACTGATGATTGAGAATTGCA TAGGATATGAGAATCAGATTTATTAATCTCCATTCCGGCAGCTTTTAAACAAGGTATTGG ATGAAAATGAACACCGACACGTCGTGTTAACGGCTTCTCCCATAATTTGGCTGAATCAGA AGGTGAGTAACGTTGGATTTTACCGTCAGTGATG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)