Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6056 cluster # 6056       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6056#0 length = 991 sequences # 4  
consensusID : consensus_6056#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 991
fasta sequence 
                              [GCGAGTATGTGAATTTTCAAGGATTATTACAGTCGCATAAACAAGCTACAGTTTCTGTCTCTTCTCCACAAGAGTCTGCTTTATCTGGAAATGGTGATATTAGTAAATCAAATGGTGATCAAACTTCAAGCATCCAACCATGTGATCCATCAAATGTTACTGCACAACCTAGTAAAACTAAAGAGCTTAGATTTCTTCCTTCTCTTCCTCGCGGTCGTGGACGTTTACATCAAGCGCTTACTAGAATGAAACGTGCAGCAACAGCATCTTGTGATCCTACTAGCCGTTCAAGTTCCAGCGTAACAACGAGAAGATTTGCTTCATCCCATGGTTTTGGAAAAAACAAATCTATTCCTATAAGTTCTCCTCTTAAATCATCCACTGAAAATATGAATTCTTCAAATAAATTAGAAAACGTTTTCAATTTACCATCTCATTTGCAGAATAACCATAATAACAGTCAACTCGCATTATTATTGGCCACGTCGGTCTCACCATCGCCTTCGTTGCAAACTCCGTGTTTGACGTACTTGCAGTTAGAATCTAATGAATCAGTTAATTCTAATATTAATTCATCTAATTTGTCAGATGGACCCCATGAATATTCAAACAAAGAAACAGGTCGTTATATCGATATATCAGTCAATCAACACTCCAGGAGAGAACATAAAGCAACTAATCAGCTTACTGTTTTAGTATCGGAAACTATGGATCATGACACAAACTCAGATGGTATCACAATCCAAAGTACTAGTATTCGAAGTGAATGCACATTGTTTGTTCAATCCAAGCATCCTTTCATACCATTGCCTATTCAATTAAGTAACCCTTTACCATTACATAAATGTCCTAGAAGTACATTATCTCCTTTTGTTCCTTTTGTGGTAGAACTATGCGTTACACTAATCGAACGCTATGGCCTTAATTGTATCGGTATTTATCGTTTATCTGGAAGCAAGGTAGCTCATGACTTCATTACCTCTGAATTAAG]

[+] EMBL CD114333             [GCGAGTATGTGAATTTTCAAGGATTATTACAGTCGCATAAACAAGCTACAGTTTCTGTCTCTTCTCCACAAGAGTCTGCTTTATCTGGAAATGGTGATATTAGTAAATCAAATGGTGATCAAACTTCAAGCATCCAACCATGTGATCCATCAAATGTTACTGCACAACCTAGTAAAACTAAAGAGCTTAGATTTCTTCCTTCTCTTCCTCGCGGTCGTGGACGTTTACATCAAGCGCTTACTAGAATGAAACGTGCAGCAACAGCATCTTGTGATCCTACTAGCCGTTCAAGTTCCAGCGTAACAACGAGAAGATTTGCTTCATCCCATGGTTTTGGAAAAAACAAATCTATTCCTATAAGTTCTCCTCTTAAATCATCCACTGAAAATATGAATTCTTCAAATAAATTAGAAAACGTTTTCAATTTACCATCTCATTTGCAGAATAACCATAATAACAGTCAACTCGCATTATTATTGGCCACGTCGGTCTCACCATCGCCTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CD166226             [                                              TACAGTTTCTGTCTCTTCTCCACAAGAGTCTGCTTTATCTGGAAATGGTGATATTAGTAAATCAAATGGTGATCAAACTTCAAGCATCCAACCATGTGATCCATCAAATGTTACTGCACAACCTAGTAAAACTAAAGAGCTTAGATTTCTTCCTTCTCTTCCTCGCGGTCGTGGACGTTTACATCAAGCGCTTACTAGAATGAAACGTGCAGCAACAGCATCTTGTGATCCTACTAGCCGTTCAAGTTCCAGCGTAACAACGAGAAGATTTGCTTCATCCCATGGTTTTGGAAAAAACAAATCTATTCCTATAAGTTCTCCTCTTAAATCATCCACTGAAAATATGAATTCTTCAAATAAATTAGAAAACGTTTTCAATTTACCATCTCA TTGCAGAATAACCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CD116237             [                                                                                                                                                                                                                                                                                                                                                                                                    TATGAATTCTTCAAATAAATTAGAAAACGTTTTCAATTTACCATCTCATTTGCAGAATAACCATAATAACAGTCAACTCGCATTATTATTGGCCACATCGGTCTCACCATCGCCTTCGTTGCAAACTCCGTGTTTGACGTACTTGCAGTTAGAATCTAATGAATCAGTTAATTCTAATATTAATTCATCTAATTTGTCAGATGGACCCCATGAATATTCAAACAAAGAAACAGGTCGTTATATCGATATATCAGTCAATCAACACTCCAGGAGAGAACATAAAGCAACTAATCAGCTTACTGTTTTAGTATCGGAAACTATGGATCATGACACAAACTCAGATGGTATCACAATCCAAAGTACTAGTATTCGAAGTGAATGCACATTGTTTGTTCAATCCAAGCATCCTTTCATACCATTGCCTATTCAATTAAGTAACCCTTTAC                                                                                                                                                             ]
[-] EMBL CD156414             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AACATAAAGCAACTAATCAGCTTACTGTTTTAGTATCGGAAACTATGGATCATGACACAAACTCAGATGGCATCACAATCCAAAGTACTAGTATTCGAAGTGAATGCACATTGTTTGTTCAATCCAAGCATCCTTTCATACCATTGCCTATTCAATTAAGTAACCCTTTACCATTACATAAATGTCCTAGAAGTACATTATCTCCTTTTGTTCCTTTTGTGGTAGAACTATGCGTTACACTAATCGAACGCTATGGCCTTAATTGTATCGGTATTTATCGTTTATCTGGAAGCAAGGTAGCTCATGACTTCATTACCTCTGAATTAAG]




>consensus_6056#0
GCGAGTATGTGAATTTTCAAGGATTATTACAGTCGCATAAACAAGCTACAGTTTCTGTCT
CTTCTCCACAAGAGTCTGCTTTATCTGGAAATGGTGATATTAGTAAATCAAATGGTGATC
AAACTTCAAGCATCCAACCATGTGATCCATCAAATGTTACTGCACAACCTAGTAAAACTA
AAGAGCTTAGATTTCTTCCTTCTCTTCCTCGCGGTCGTGGACGTTTACATCAAGCGCTTA
CTAGAATGAAACGTGCAGCAACAGCATCTTGTGATCCTACTAGCCGTTCAAGTTCCAGCG
TAACAACGAGAAGATTTGCTTCATCCCATGGTTTTGGAAAAAACAAATCTATTCCTATAA
GTTCTCCTCTTAAATCATCCACTGAAAATATGAATTCTTCAAATAAATTAGAAAACGTTT
TCAATTTACCATCTCATTTGCAGAATAACCATAATAACAGTCAACTCGCATTATTATTGG
CCACGTCGGTCTCACCATCGCCTTCGTTGCAAACTCCGTGTTTGACGTACTTGCAGTTAG
AATCTAATGAATCAGTTAATTCTAATATTAATTCATCTAATTTGTCAGATGGACCCCATG
AATATTCAAACAAAGAAACAGGTCGTTATATCGATATATCAGTCAATCAACACTCCAGGA
GAGAACATAAAGCAACTAATCAGCTTACTGTTTTAGTATCGGAAACTATGGATCATGACA
CAAACTCAGATGGTATCACAATCCAAAGTACTAGTATTCGAAGTGAATGCACATTGTTTG
TTCAATCCAAGCATCCTTTCATACCATTGCCTATTCAATTAAGTAACCCTTTACCATTAC
ATAAATGTCCTAGAAGTACATTATCTCCTTTTGTTCCTTTTGTGGTAGAACTATGCGTTA
CACTAATCGAACGCTATGGCCTTAATTGTATCGGTATTTATCGTTTATCTGGAAGCAAGG
TAGCTCATGACTTCATTACCTCTGAATTAAG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)