These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6176#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1711 fasta sequence [GAAAACCTTTGTTTAAAAGCGAAAAATGGTGCACAAAATGGTAATGTGGAAAATGGAAAATCAATTTTTAATCAAAAATCTTGTCAATTTGTTTCACCTACATTTTGTTCGCGTAATAATCTTCCGTCACCAGGTGTAAAGAATTCAGATAGTTCTGCATTTCCGCATCTTATCAATAGTGGTCCTCCTTTGAACATCAATAATAAAAGTGTTGGTGTTTATGCATTATCTGAACTACCGAACACATCATCATTATCCATGCAAGGTGTTTACGAAAAGAACCTCGTTGAGAATTCGAATAGCAGAAGAACAATAGTTCCACCTGGTCGAGTGTATCATAGAACAGTAGATCGAAGGTTAGTAGTACGTGGTCAGGAAAATGATTGCGATTATTCATCTATTAAACCTCAAACCAACAATAAAGGATATGTGAAATCAAAGTCGAATCGACCTAGCATACGTACTTTGTCTAATAATAATTCACGTCAAATTTCACATCATACTGGCAATTCCAGAGATTTCAGTTGTTCTAGAATAGTTAATTCTTCACGATCCAACAACAATACAACTCATTATTCAAGTAACGGCTTAAATCGTTCAATTAAATATTATTCTACTTATCAATTAAATGGACCACATCAATCTGATTCCAGTAGCAGTAGTGGTAATAGTTGTACATCATCAGTTAGTAGTGAATACTCTACAGAAGATTCACCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTGCCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAGTCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTCGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTACTCATCTCCAACCAGGAAAACAGCAATCTTTACGTGTATATACTGCCTTTGATAGTATTCAAAGAAGACCTCAAGTTCCATTTCAACCATCTTTATATTTCTACCCTTCGACAGAACGAATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAGAACTAAAGAATCTCGTGCACGTCCTTTAAGAGCTACACACCCTTGTGATGATAACTCTTTTTTACAATCATTACCTTCAAACCTGTTTGAAAATGAAAATACTTGTAGAAATATCATTTTAAATCCATCTACTTATTATTATGACTATGAACGAACTGATCAATCTGCGAGATTGG] [+] EMBL SMVIFEPIB [GAAAACCTTTGTTTAAAAGCGAAAAATGGTGCACAAAATGGTAATGTGGAAAATGGAAAATCAATTTTTAATCAAAAATCTTGTCAATTTGTTTCACCTACATTTTGTTCGCGTAATAATCTTCCGTCACCAGGTGTAAAGAATTCAGATAGTTCTGCATTTCCGCATCTTATCAATAGTGGTCCTCCTTTGAACATCAATAATAAAAGTGTTGGTGTTTATGCATTATCTGAACTACCGAACACATCATCATTATCCATGCAAGGTGTTTACGAAAAGAACCTCGTTGAGAATTCGAATAGCAGAAGAACAATAGTTCCACCTGGTCGAGTGTATCATAGAACAGTAGATCGAAGGTTAGTAGTACGTGGTCAGGAAAATGATTGCGATTATTCATCTATTAAACCTCAAACCAACAATAAAGGATATGTGAAATCAAAGTCGAATCGACCTAGCATACGTACTTTGTCTAATAATAATTCACGTCAAATTTCACATCATACTGGCAATTCCAGAGATTTCAGTTGTTCTAGAATAGTTAATTCTTCACGATCCAACAACAATACAACTCATTATTCAAGTAACGGCTTAAATCGTTCAATTAAATATTATTCTACTTATCAATTAAATGGACCACATCAATCTGATTCCAGTAGCAGTAGTGGTAATAGTTGTACATCATCAGTTAGTAGTGAATACTCTACAGAAGATTCACCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTGCCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAGTCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTCGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTACTCATCTCCAACCAGGAAAACAGCAATCTTTACGTGTATATACTGCCTTTGATAGTATTCAAAGAAGACCTCAAGTTCCATTTCAACCATCTTTATATTTCTACCCTTCGACAGAACGAATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAGAACTAAAGAATCTCGTGCACGTCCTTTAAGAGCTACACACCCTTGTGATGATAACTCTTTTTTACAATCATTACCTTCAAACCTGTTTGAAAATGAAAATACTTGTAGAAATATCATTTTAAATCCATCTACTTATTATTATGACTATGAACGAACTGATCAATCTGCGAGATTGG] [+] EMBL CD189187 [ CCTACTATTGCTTCACATATTTCATCAAGTTTATCTTCCAGTTCTATTGATGATAATTTCAATTTAAATAATTCTTCAAGATACAAACTAAACAGTAAATTATCAATGCCTGAATCTAATTGGCAACGTAATGCATTACCGAATTCGTCTGTTTCGAAATCAAATATACATGATGAACAGTCGAAATCACATAGAAAATATCATCGGTCAACAAGTCTTTGTAAACCATCGGATTCTTCTCGTACGCCACTACGATCTGTAACAAACATTCATGACAATTACGGCTCTTTGAATCGTTTGAATTCTGTCTCTTTTAAGAAATCTGCATCAAGTAATCCTTCGAAGTCTAAATTTGTACATAATCTAAAAAATACATTTGGTGGTTCAGTACCCGTTGTAGCCAATCTGGACACATCGTACGAGCCTAC ] [-] EMBL CD117001 [ AATTCTCTACTCTCATCCTGCTCAAATACCATCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACTCTATCGTCAGCCAG ] [+] EMBL CD189511 [ cgTCTGTACACTTTCTTAGTGATCACCATGAAGGTGTTTTGTTTTCACCACGAATCCCTTCTAGTTTAAATCATACCTCTGCTTCTCGTCTGAAGACAACATTATGCGGTGCTTGTGGTGGAAGTGGTCAAGTATTAGATAATTCCAGTGATGGGAATCCTCTTAGTGGTCGTTTAACTGAACCTCCCCTTATCCGCCCAAATATTGGCTTGAACCCGTTATATCGAAAAACT ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||