These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6222#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 721 fasta sequence [GGTAATTATTTTATTTACACATTTGGTCCAAACAAAATACACATAGGTATTTTTATTATTACTAATATGAATATTGTTGTAAAAATATTGAAAGGAAAACTAAATACCATTTCTTTACTGATACGATGTTTGATAAAAATACTGATTGTTTTATATCCTATAGATGAATAGACAACACAAACTCAAAAAATTGATAAGGTAAAGAAAATTATGTAACCAGAGGCAACTGATTCACTTTAAGTGACAAAGGAAGAGAAAAACTGACAGGCTGTTAGGAAAATGAAAGAAACTTCTGTAGTGAATAGCGACACACGAAAATAAGAACGATTGATAACCACCGAGGATTCATTGATATACAACTAGAAACAATTTTGAGTATAGGGTGCGAAAAAAAATGAATGAAGAGGAAAATAAACCATAGTACATATCGGACTAAATACACTCTAAAAAAACTACAGTTAAAGTACAAAAAACGTTTATCGATATTCATTGACGAAAATAGATTAAGACTTACTGAAAGACATTTCAATATATCAACATCATGATCGAAAACAAGATGAATCAGTTTTAACTTTTAGTTGATCGAAGGAAAAGAAGACAAATGCAACTGANAAATTTTTCNTAAGAAAAACTC-AGATACAAATTTNAGGATGTACGATAAATTAATCTAATTGACTTCTCTACAAATTGAGAACCAACTCTTACGAATTCGTTACTTACA] [+] EMBL AW017031 [GGTAATTATTTTATTTACACATTTGGTCCAAACAAAATACACATAGGTATTTTTATTATTACTAATATGAATATTGTTGTAAAAATATTGAAAGGAAAACTAAATACCATTTCTTTACTGATACGATGTTTGATAAAAATACTGATTGTTTTATATCCTATAGATGAATAGACAACACAAACTCAAAAAATTGATAAGGTAAAGAAAATTATGTAACCAGAGGCAACTGATTCACTTTAAGTGACAAAGGAAGAGAAAAACTGACAGGCTGTTAGGAAAATGAAAGAAACTTCTGTAGTGAATAGCGACACACGAAAATAAGAACGATTGATAACCACCGAGGATTCATTGATATACAACTAGAAACAATTTTGAGTATAGGGTGCGAAAAAAAATGAATGAAGAGGAAAATAAACCATAGTACATATCGGACTAAATACACTCTAAAAAAACTACAGTTAAAGTACAAAAAACGTTTATCGATATTCATTGACGAAAATAGATTAAGACTTACTGAAAGACATTTCAATATGTCAACATCATGATCGAAAACAAGATGAATCAGTTCTAACTT ] [+] EMBL AI977143 [GGTAATTATTTTATTTACACATTTGTTCCAAACAAAATACACATAGGTATTTTTATTATTACTAATATGAATATTGTTGTAAAAATATTGAAAGGAAAACTAAATACCATTTTTTTACTGATACGATGTTTGATAAAAATACTGATTGTTTTATATCCTATAGATGAATAGACAACACAAACTCAAAAAATTGATAAGGTAAAGAAAATTATGTAACCAGAGGCAACTGATTCACTCTAAGTGACAAAGGAAGAGAAAAACTGACAGGCTGTTAGGAAAATGAAAGAAACTTCTGTAGTGAATAGCGACACACGAAAATAAGAACGATTGATAACCACCGAGGATTCATTGATATACAACTAGAAACAATNTTGAGTATAGGGTGCGAAAAAAAATGAATGAAGAGGAAAATAAACCATAGTACATATCGGACTAAATACACTCTAAGAAAACTACAGTTAAAGTACAGAAAACGTTTATCGATATTCATTGACGAANATAGATTAAGACTTACTGAAAG ] [+] EMBL CD141389 [ AAATGAAAGAAACTTCTGTAGTGAATAGCGACACACGAAAATAAGAACGATTGATAACCACCGAGGATTCATTGATATACAACTAGAAACAATTTTGAGTATAGGGTGCGAAAAAAAATGAATGAAGAGGAAAATAAACCATAGTACATATCGGACTAAATACACTCTAAAAAAACTACAGTTAAAGTACAAAAAACGTCTATCGATATTCATTGACGAAAATAGATTAAGACTTACTGAAAGACATTTCAATATATCAACATCATGATCGAAAACAAGATGAATCAGTTTTAACTTTTAGTTGATCGAAGGAAAAGAAGACAAATGCAACTGANAAATTTTTCNTAAGAAAAACTC AGATACAAATTTNA ] [-] EMBL CD141341 [ CTAAATACACTCTAAAAAAACTACAGTTAAAGTACAAAAAACGTTTATCGATATTCATTGACGAAAATAGATTAAGACTTACTGAAGGACATTTCAATATATCAACATCATGATCGAAAACAAGATGAATCAGTTTTAACTTTTAGTTGATCGAAGGAAAAGAAGACAAATGCAACTGAAAAATTTTTCTAAAGAAAAACTCAAGATACAAATTTACGGATGTACGATAAATTAATCTAATTGACTTCTCTACAAATTGAGAACCAACTCTTACGAATTCGTTACTTACA] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||