cluster # 6231

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Schistosoma mansoni
cluster # 6231 cluster # 6231 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6231#0 length = 522 sequences # 4

consensusID : consensus_6231#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 522
fasta sequence

                              [CAGTGATGCATTCAGTTTGGCTAAACGCGTGGCTTGTTGTTGCATCGCATCCAGATCAACATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAACTTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTAGGATTTGCAG-AACAAGTTGGAATCGGTGAATGGTTGTTCGATGCTTCATTATCTTCAATTGCATCTTTAAGCTGTTTGTTTTCTTCTTTCAACTTCTCAATTAGTTGGGAAAGTTCTTGAACTTCAGAATGCCATGTTTCTTCAATTTGTTCTAACTCCTTTTTATGCCTGTTCTGATCTTCTTTACGTTCCAATTTTTCAAGTTCTAACCGATGTACGGCGGTTTGAAGGGTAATAATCTCCCTTCCTTCTGGCTCGAACTTTGTTGCGAAATCTTCCAATTCTTCAAGGACGCCTTATTACTTTAGGCATTAAGTTAGACACTGAGTACGGCCCATACTTATCAATAATAGACTCAA]

[+] EMBL CD065180             [CAGTGATGCATTCAGTTTGGCTAAACGCGTGGCTTGTTGTTGCATCGCATCCAGATCGACATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAACTTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTAGGATTTGCAG AACAAGTTGGAATCGGTGAATGGTTGTTCGATGCTTCATTATCTTCAATTGCATCTTTAAGCTGTTTGTTTTCTTCTTTCAACTTCTCAATTAGTTGGGAAAGTTCTTGAACTTCAGAATGCCATGTTTCTTCAATTTGTTCTAACTCCTTTTTATGCCTGTTCTGATCTTCTTTACGTTCCAATTTTTCAAGTTCTAACCGATGTACGGCGGTTTGAAGGGTAATAATCTCCCTTCCTTCTGGCTCGAACTTTGTTGCGAAATCTTCCAATTCTTCAAGGACGCCTTATTACTTTAGGCATTAAGTTAGACACTGAGTACGGCCCATACTTATCAATAATAGACTCAA]
[+] EMBL CD166636             [           TCAGTTTGGCT AACGCGTGGCTTGTTGTTGCATCGCATCCAGATCAACATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAACTTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTAGGATTTGCAG AACAAGTTGGAATCGGT                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CD063985             [                        ACGCGTGGCTTGTTGTTGCATCGCATCCAGATCAACATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAACTTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTA GATTTGCAG AACAAGTTGGAAT                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD166841             [                        ACGCGTGGCTTGTTGTTGCATCGCATCCAGATCAACATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAACTTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTA GATTTGCAGAAACAA                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_6231#0
CAGTGATGCATTCAGTTTGGCTAAACGCGTGGCTTGTTGTTGCATCGCATCCAGATCAAC
ATGTTTTTGAGTAAGCTGTTGACGTAATGAACGAATAAGTATTTTCTGACGGTCTATAAC
TTCTTTAAGGCGTATCATAAGTTGTATTTCCTCCACATTTGTAGGATTTGCAGAACAAGT
TGGAATCGGTGAATGGTTGTTCGATGCTTCATTATCTTCAATTGCATCTTTAAGCTGTTT
GTTTTCTTCTTTCAACTTCTCAATTAGTTGGGAAAGTTCTTGAACTTCAGAATGCCATGT
TTCTTCAATTTGTTCTAACTCCTTTTTATGCCTGTTCTGATCTTCTTTACGTTCCAATTT
TTCAAGTTCTAACCGATGTACGGCGGTTTGAAGGGTAATAATCTCCCTTCCTTCTGGCTC
GAACTTTGTTGCGAAATCTTCCAATTCTTCAAGGACGCCTTATTACTTTAGGCATTAAGT
TAGACACTGAGTACGGCCCATACTTATCAATAATAGACTCAA

clustalw multiple alignements is not computed in this case