Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6233 cluster # 6233       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6233#0 length = 802 sequences # 4  
consensusID : consensus_6233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 802
fasta sequence 
                              [AGAGAGAGAGAGAGACCCCCTCTACTAGCTGAACGAAATATCATACCAGGAATAAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGGATGCCGCTTCGCTAAGTGGCGTTGTGTTTTGAANATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAATGTACTTGCACGTTACGCTTCCATCTGTCAGCANAATGGTTTGGTACCGATTGTTGAACCTGAGGTGCTTCCTGATGGTGATCATGATTTACTAACTGCTCAGAGAGTAACAGAACAAGTTTTGGCATTCGTGTACAAGGCTTTGGCCGACCATCATGTTTACTTAGAAGGAACGCTTTTAAAACCCAATATGGTTACTGCTGGACAGGCCTGC-AAAAAAGCTTACACACCACAAGAAAATGCTTTGGCTACTGTGCGAGCTCTT-CAGCGCACAGTCCCTCCAGCTGTTCCAGGTATCACATTCTTGTCCGGAGGTCAATCAGAATTGGACGCTACTAAAAATCTGAACGAAATATCATACCAGGAATGAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGATGCCGCTTCGCTAAGTGGCGTTGTGTTTTGAAGATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAATGTACTTG]

[+] EMBL AI111127             [AGAGAGAGAGAGAGACCCCCTCTACTAGCTGAACGAAATATCATACCAGGAATAAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGGATGCCGCTTCGCTAAGTGGCGTTGTGTTTTGAANATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAATGTACTTGCACGTTACGCTTCCATCTGTCAGCANAATGGTTTGGTACCGATTGTTGAACCTGAGGTGCTTCCTGATGGTGATCATGATTTACTAACTGCTCAGAGAGTAACAGAACAAGTTTTGGCATTCGTGTACAAGGCTTTGGCCGACCATCATGTTTACTTAGAAGGAACGCTTTTAAAACCCAATATGGTTACTGCTGGACAGGCCTGC AAAAAAGCTTACACACCACAAGAAAATGCTTTGGCTACTGTGCGAGCTCTT CAGCGCACAGTCCCTCCAGCTGTTCCAGGTATCACATTC                                                                                                                                                                                                                                                                  ]
[+] EMBL AI111139             [AGAGAGAGAGAGAGACCNCCTCTACTAGCTGAACGAAATATCATACCAGGAATAAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTT GGATGCCGCNTCGCTAAGTGGCGTTGTGTTTTGAAAATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAATGTACTTGCACGTTACGCTTCCATCTGTCAGCANAATGGTTTGGTACCGATTGTTGAACCTGAGGTGCTTCCTGATGGTGATCATGATTTACTANCTGCTCAGAGAGTAACAGAACAAGTTTTGGCATTCGTGTNCAAGGCTTTGGCCGACCATCATGTTTACTTAGAAGGAACGCTTTTAAAACCCAATATGGTTACTGCTGGga                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CD184649             [                                                                                                                                                                                                                                                                                                                         GATGGTGATCATGATTTACTAACTGCTCAGAGAGTAACAGAACAAGTTTTGGCATTCGTGTACAAGGCTTTGGCCGACCATCATGTTTACTTAGAAGGAACGCTTTTAAAACCCAATATGGTTACTGCTGGACAGGCCTGC AAAAAAGCTTACACACCACAAGAAGATGCTTTGGCTACTGTGCGAGCTCTT CAGCGCACAGTCCCTCCAGCTGTTCCAGGTATCACACTCTTGTCCGGAGGTCAATCAGAATTGGACGCTACTAAAAATCTGAACGAAATATCATACCAGGAATGAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGATGCCGCTTCGCTAAGTGGCGTTGTGTTTTGAAGATCTCTTCACACACACCCTCTTA                                ]
[+] EMBL CD187936             [                                                                                                                                                                                                                                                                                                                                                                                                                TACTTAGAAGGAACGCTTTTAAAACCCAATATGGTTACTGCTGGTCAGGCCTGCAAAAAAAGCTTACACACCACAAGAAAATGCTTTGGCTACTGTGCGAGCTCTTACAGCGCACAGTCCCTCCAGCTGTTCCAGGTATCACATTCTTGTCCGGAGGTCAATCAGAATTGGACGCTACTAAAAATCTGAACGAGATATCATACCAGGAGTAAAGGTCGATAGAGGTGTTGTGCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGATGATCTGGCTTCACGCTGTGCTGAAAATAGGAGACTTGGATGCCGCTTCGCTAAGTGGCGTTGTGTTTTGAAGATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAATGTACTTG]




>consensus_6233#0
AGAGAGAGAGAGAGACCCCCTCTACTAGCTGAACGAAATATCATACCAGGAATAAAGGTT
GATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACAACTCAGGGTCTTGAT
GATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGGATGCCGCTTCGCTAAGTGGCG
TTGTGTTTTGAANATCTCTTCACACACACCCTCTTATCTAGCTATGCTCGAAAATGCTAA
TGTACTTGCACGTTACGCTTCCATCTGTCAGCANAATGGTTTGGTACCGATTGTTGAACC
TGAGGTGCTTCCTGATGGTGATCATGATTTACTAACTGCTCAGAGAGTAACAGAACAAGT
TTTGGCATTCGTGTACAAGGCTTTGGCCGACCATCATGTTTACTTAGAAGGAACGCTTTT
AAAACCCAATATGGTTACTGCTGGACAGGCCTGCAAAAAAGCTTACACACCACAAGAAAA
TGCTTTGGCTACTGTGCGAGCTCTTCAGCGCACAGTCCCTCCAGCTGTTCCAGGTATCAC
ATTCTTGTCCGGAGGTCAATCAGAATTGGACGCTACTAAAAATCTGAACGAAATATCATA
CCAGGAATGAAGGTTGATAAAGGTGTTGTTCCACTTGCAGGCACAGACAATGAGACAACA
ACTCAGGGTCTTGATGATCTTGCTTCACGCTGTGCTGAATATTGGAGACTTGGATGCCGC
TTCGCTAAGTGGCGTTGTGTTTTGAAGATCTCTTCACACACACCCTCTTATCTAGCTATG
CTCGAAAATGCTAATGTACTTG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)