cluster # 6540

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Schistosoma mansoni
cluster # 6540 cluster # 6540 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6540#0 length = 427 sequences # 4

consensusID : consensus_6540#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 427
fasta sequence

                              [GGTTGGGAACAACATAAAGAGGAAGAGGCAGGGGAATGTGAAATAATCCATGTTTCTGGTGGGTGAGTTTTTTCCAAATTATTCAACATTGCATTCGATGTAAAAGATGAAGGATTGTTCATACTACTTAATGTCTGACTATTATCATTAGTAGTAGTATTAGTAGTGCCGATATTGCGATTGATTTTAGTAGATGTATTATCATTTTTATTCTTCTCAGCAGAGGTAGTGAAATTGGATGTAGTATCACATA-A-TGAAGGG-TCACTAGCTGGTATGGTAG-ATGGAGTTTCAGCTCTAGTCTCAGTCAACTTTGACTGTGTCGGGAATGACATTAGTGAATCTGATGTAATTGACATATTTGCATTGATCTCACTACCTGTATAATAATTATGAGGTGATAATGATGTAGATGAATTTATCGTCATGT]

[+] EMBL CD066356             [GGTTGGGAACACCATAAAGAGGAAGAGGCAGGGGAATGTGAAATAATCCATGTTTCTGGTGGGTGAGTTTTTTCCAAATTATTCAACATTGCATTCGATGTAAAAGATGAAGGATTGTTCATACTACTTAATGTCTGACTATTATCATTAGTAGTAGTATTAGTAGTGCCGATATTGCGATTGATTTTAGTAGATGTATTATCATTTTTATTCTTCTCAGCAGACGTAGTGAAATTGGATGTAGTATCACATA A TGAAGGG TCACTAGCTGGTATGGTAG ATGGAGTTTCAGCTCTAGTCTCAGTCAACTTTGACTGTGTCGGGAATGACATTAGTGAATCTGATGTAATTGACATATTTGCATTGATCTCAC                                                      ]
[+] EMBL CD066358             [GGTTGGGAACAAGAGAAAGAGGAAGAGGCATGGGAATGTGAAATAATCCATGTTTCTGGTGGGTGAGTTTTTTTCAAATTATTCCAC                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CD066357             [   TGGGAACAACATAAAGAGGAAGAGGCAGGGGAATGTGAAATAATCCATGTTTCTGGTGGGTGAGTTTTTTCCAAATTATTCAACATTGCATTCGATGTAAAAGATGAAGGATTGTTCATACTACTTAATGTCTGACTATTATCATTAGTAGTAGTATTAGTAGTGCCGATATTGCGATTGATTTTAGTAGATGTATTATCATTTTTATTCTTCTCAGCAGAGGTAGTGAAATTGGATGTAGTATCACATA A TGAAGGG TCACTAGCTGGTATGGTAG ATGGAGTTTCAGCTCTAGTCTCAGTCAACTTTGACTGTGTCGGGAATGACATTAGTGAATCTGATGTAATTGACATATTTGCATTGATCTCACTACCTGTATAATAATTATGAGGTGATAATGATGTAGATGAATTTATCGTCATGT]
[+] EMBL CD067448             [                                       GAAATAATCCATGTTTCTGGTGGGTGAGTTTTTTCCAAATTATTCAACATTGCATTCGATGTAAAAGATGAAGGATTGTTCATACTACTTAATGTCTGACTATTATCATTAGTAGTAGTATTAGTAGTGCCGATATTGCGATTGATTTTAGTAAATGTATTATCATTTTTATTCTTCTCAACAAAGGTAGTGAAATTGGATGTAGTATCACATATATTGAAGGGCTC TTACCTGGTTTGG AGAATGGAATTCAACCTCTATTCTCAGTCAACTTTGACTGTGTCGGGAATGACATTAGTGAATCTGATGTAATTGACATATTTGCATTGATCTCACTACCTGTATAATAATTATGAGGGGATAA                          ]




>consensus_6540#0
GGTTGGGAACAACATAAAGAGGAAGAGGCAGGGGAATGTGAAATAATCCATGTTTCTGGT
GGGTGAGTTTTTTCCAAATTATTCAACATTGCATTCGATGTAAAAGATGAAGGATTGTTC
ATACTACTTAATGTCTGACTATTATCATTAGTAGTAGTATTAGTAGTGCCGATATTGCGA
TTGATTTTAGTAGATGTATTATCATTTTTATTCTTCTCAGCAGAGGTAGTGAAATTGGAT
GTAGTATCACATAATGAAGGGTCACTAGCTGGTATGGTAGATGGAGTTTCAGCTCTAGTC
TCAGTCAACTTTGACTGTGTCGGGAATGACATTAGTGAATCTGATGTAATTGACATATTT
GCATTGATCTCACTACCTGTATAATAATTATGAGGTGATAATGATGTAGATGAATTTATC
GTCATGT

clustalw multiple alignements is not computed in this case