cluster # 6562

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Schistosoma mansoni
cluster # 6562 cluster # 6562 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6562#0 length = 505 sequences # 4

consensusID : consensus_6562#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 505
fasta sequence

                              [TGCAGCTTCTATACCAAAACATTCAACTGATCGTTATGTTCACGACTTGGCGTCACCTCAATTATTCATCTATTTATATGCTCCAATTATTGAGCAACTTAAGCCAACCGATTTCGATACTCTCAAGTTAGAAGCAGGATTACGCTTATGGATTCCATTAATGGAATATTGTCAACCAAATCGTGGGACATTATCATCACCTGTTAAATTTTTTACTCATGATTCAAATATACTATCTCGGCCAGTGGTATTAAATATTGATGGAATAGAAAGTCCTAAAACGTCATCCATTTTAAACGATTATATCGAGAGAAAATCTGTGAGTTTGGAAACTTCTGAAGAAATACCTACGAATGTTCATACTGTTAATATATCGGATAAAGGTTGTGAAATCAATAATAAATTACCATCAGCTGTTAATTCATTCGAGTTGCTAGTTGACAGTGCTTCTATCCCTCATGTTGAAGCCAATTCAGATGAATCAGTAAGTAGTGCAATAAATATT]

[-] EMBL CD139616             [TGCAGCTTCTATACCAAAACATTCAACTGATCGTTATGTTCACGACTTGGCGTCACCTCAATTATTCATCTATTTATATGCTCCAATTATTGAGCAACTTAAGCCAACCGATTTCGATACTCTCAAGTTAGAAGCAGGATTACGCTTATGGATTCCATTAATGGAATATTGTCAACCAAATCGTGGGACATTATCATCACCTGTTAAATTTTTTACTCATGATTCAAATATACTATCTCGGCCAGTGGTATTAAATATTGATGGAATAGAAAGTCCTAAAACGTCATCCATTTTAAGCGATTATATCGAGAGAAAA                                                                                                                                                                                             ]
[+] EMBL CD067111             [                                                                                                                                                    TGGATTCCATTAATGGAATATTGTCAACCAAATCGTGGGACATTATCATCACCTGTTAAATTTTTTACTCATGATTCAAATATACTATCTCGGCCAGTGGTATTAAATATTGATGGAATAGAAAGTCCTAAAACGTCATCCATTTTAAACGATTATATCGAGAGAAAATCTGTGAGTTTGGAAACTTCTGAAGAAATACCTACGAATGTTCATACTGTTAATATATCGGATAAAGGTTCTGAAATCAATAATAAATTACCATCAGCTGTTAATTCATTCGAATTGCTAGTTGACAGTGCTTCTATCCCTCATGTTGAAGCCAATTCAGATGAATCAGTAAGTAGTG           ]
[-] EMBL CD067398             [                                                                                                                                                                                                     CACCTGTTAAATTTTTTACTCATGATTCAAATATACTATCTCGGCCAGTGGTATTAAATATTGATGGAATAGAAAGTCGTAAAAGGTCATCCATTTTAAACGATTATATCGAGAGAAAATCTGTGAGTTTGGAAACTTCTGAAGAAATACCTACGAATGTTCATACTGTTAATATATCGGATAAAGGTTGTGAAATCAATAATAAATTACCATCAGCTGTTAATTCATTCGAGTTGCTAGTTGACAGTGTTTCTATCCCTCATGTTGAAGCCAATTCAGATGAATCAGTAAGTAGTGCAATAAATATT]
[-] EMBL CD067397             [                                                                                                                                                                                                                                                                                                                                                                                      CGGATAAAGGTTATGAAATCAATAATGAATTACCATCAGCTGTTAATTCATTCGAGTTGCTAGTTGACAGTGCTTCTATCCCTCATGTTGAAGCCAATTCAGATGAATCAGTAAGTAGTGCTAT       ]




>consensus_6562#0
TGCAGCTTCTATACCAAAACATTCAACTGATCGTTATGTTCACGACTTGGCGTCACCTCA
ATTATTCATCTATTTATATGCTCCAATTATTGAGCAACTTAAGCCAACCGATTTCGATAC
TCTCAAGTTAGAAGCAGGATTACGCTTATGGATTCCATTAATGGAATATTGTCAACCAAA
TCGTGGGACATTATCATCACCTGTTAAATTTTTTACTCATGATTCAAATATACTATCTCG
GCCAGTGGTATTAAATATTGATGGAATAGAAAGTCCTAAAACGTCATCCATTTTAAACGA
TTATATCGAGAGAAAATCTGTGAGTTTGGAAACTTCTGAAGAAATACCTACGAATGTTCA
TACTGTTAATATATCGGATAAAGGTTGTGAAATCAATAATAAATTACCATCAGCTGTTAA
TTCATTCGAGTTGCTAGTTGACAGTGCTTCTATCCCTCATGTTGAAGCCAATTCAGATGA
ATCAGTAAGTAGTGCAATAAATATT

clustalw multiple alignements is not computed in this case