These datas are free for academic use only, please contact me for any other use. Schistosoma mansoni see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6715#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 863 fasta sequence [CAAATTATTCGAAAAAATAAAAAACAAGCAAATAAACAAAAAAAGATGTATTGTTTATACAAATAAAATTATAAGAAACATTAGTATAAAAAGAAAAAGGAAGCATTAATTGGGCTTATTAATTGTTCTTCATCCCCCCCGTCTCCCTCTCCATTTTAATTTGAAGAAAATTTTTGAAGTTGATTATTTTCTAAATTATATTTTATAGATTCTTTTACAACAATTGGCTCTACTCTCCAAATATCACGTGCATATTCACGTACTGTACGATCAGAGGAGAATTTCCCAGCAGCAGCTATATTCATTAGAACCATTTTTGACCATCTTACTTCATCCTTATATGCTGATTCAACTTCAGCTTGAGCACGCATATAATCAGCATAATCTGCACATACCATAAATTTATCTTCTGTAACTAGTTTTTTATATAGGTCTTTAAATAAATCAGGTTCATTCGGACAGTAATAACCATCACGTATTTGATCTAAGCACAAACGAAGTTCTGGATTGGAAGATATATATCTCATTGGATTATACCCTGTT-TTACGCAAATAATTGAC-TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATAT-AGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT-TTAT-ATCATTTTAG] [+] EMBL CD074434 [CAAATTATTCGAAAAAATAAAAAACAAGCAAATAAACAAAAAAAGATGTATTGTTTATACAAATAAAATTATAAGAAACATTAGTATAAAAAGAAAAAGGAAGCATTAATTGGGCTTATTAATTGTTCTTCATCCCCCCCGTCTCCCTCTCCATTTTAATTTGAAGAAAATTTTTGAAGTTGATTATTTTCTAAATTATATTTTATAGATTCTTTTACAACAATTGGCTCTACTCTCCAAATATCACGTGCATATTCACGTACTGTACGATCAGAGGAGAATTTCCCAGCAGCAGCTATATTCATTAGAACCATTTTTGACCATCTTACTTCATCCTTATATGCTGATTCAACTTCAGCTTGAGCACGCATATAATCAGCATAATCTGCACATACCATAAATTTATCTTCTGTAACTAGTTTTTTATATAGGTCTTTAAATAAATCAGGTTCATTCGGACAGTAATAACCATCACGTATTTGATCTAAGCACAAACGAAGTTCTGGATTGGAAGATATATATCTCATTGGATTATACCCTGTT TTACGCAAATAATTGAC TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTG AATATTTC ATATTTGA ] [-] EMBL CD181936 [ GATATAT TCTCATT GA TATA CCTGTTNNTACGCAAATAANTGAC TTCTTCNATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATTGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATATAAGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT TTATAATCATTTTAG] [-] EMBL CD181959 [ TATATATCTCATNGGATTATACCCTGTT TTACGCAAATAA TGACTTTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATATAAGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT TTATAATCATTTTAG] [+] EMBL CD138497 [ TATATCTCATTGGATTATACCCTGTT TTACGCAAATAATTGAC TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATAT AGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCNACTGAATTAANTAATTNNTAT ATCATTTTA ] clustalw multiple alignements is not computed in this case |
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||