Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6715 cluster # 6715       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6715#0 length = 863 sequences # 4  

consensusID : consensus_6715#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 863
fasta sequence
                              [CAAATTATTCGAAAAAATAAAAAACAAGCAAATAAACAAAAAAAGATGTATTGTTTATACAAATAAAATTATAAGAAACATTAGTATAAAAAGAAAAAGGAAGCATTAATTGGGCTTATTAATTGTTCTTCATCCCCCCCGTCTCCCTCTCCATTTTAATTTGAAGAAAATTTTTGAAGTTGATTATTTTCTAAATTATATTTTATAGATTCTTTTACAACAATTGGCTCTACTCTCCAAATATCACGTGCATATTCACGTACTGTACGATCAGAGGAGAATTTCCCAGCAGCAGCTATATTCATTAGAACCATTTTTGACCATCTTACTTCATCCTTATATGCTGATTCAACTTCAGCTTGAGCACGCATATAATCAGCATAATCTGCACATACCATAAATTTATCTTCTGTAACTAGTTTTTTATATAGGTCTTTAAATAAATCAGGTTCATTCGGACAGTAATAACCATCACGTATTTGATCTAAGCACAAACGAAGTTCTGGATTGGAAGATATATATCTCATTGGATTATACCCTGTT-TTACGCAAATAATTGAC-TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATAT-AGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT-TTAT-ATCATTTTAG]

[+] EMBL CD074434             [CAAATTATTCGAAAAAATAAAAAACAAGCAAATAAACAAAAAAAGATGTATTGTTTATACAAATAAAATTATAAGAAACATTAGTATAAAAAGAAAAAGGAAGCATTAATTGGGCTTATTAATTGTTCTTCATCCCCCCCGTCTCCCTCTCCATTTTAATTTGAAGAAAATTTTTGAAGTTGATTATTTTCTAAATTATATTTTATAGATTCTTTTACAACAATTGGCTCTACTCTCCAAATATCACGTGCATATTCACGTACTGTACGATCAGAGGAGAATTTCCCAGCAGCAGCTATATTCATTAGAACCATTTTTGACCATCTTACTTCATCCTTATATGCTGATTCAACTTCAGCTTGAGCACGCATATAATCAGCATAATCTGCACATACCATAAATTTATCTTCTGTAACTAGTTTTTTATATAGGTCTTTAAATAAATCAGGTTCATTCGGACAGTAATAACCATCACGTATTTGATCTAAGCACAAACGAAGTTCTGGATTGGAAGATATATATCTCATTGGATTATACCCTGTT TTACGCAAATAATTGAC TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTG AATATTTC ATATTTGA                                                                                                                                                                                                                                             ]
[-] EMBL CD181936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATATAT TCTCATT GA TATA CCTGTTNNTACGCAAATAANTGAC TTCTTCNATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATTGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATATAAGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT TTATAATCATTTTAG]
[-] EMBL CD181959             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TATATATCTCATNGGATTATACCCTGTT TTACGCAAATAA TGACTTTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATATAAGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAATTAATTAATT TTATAATCATTTTAG]
[+] EMBL CD138497             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATATCTCATTGGATTATACCCTGTT TTACGCAAATAATTGAC TTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGACCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCGTTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGTTCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAAAATAT AGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCNACTGAATTAANTAATTNNTAT ATCATTTTA ]


>consensus_6715#0 CAAATTATTCGAAAAAATAAAAAACAAGCAAATAAACAAAAAAAGATGTATTGTTTATAC AAATAAAATTATAAGAAACATTAGTATAAAAAGAAAAAGGAAGCATTAATTGGGCTTATT AATTGTTCTTCATCCCCCCCGTCTCCCTCTCCATTTTAATTTGAAGAAAATTTTTGAAGT TGATTATTTTCTAAATTATATTTTATAGATTCTTTTACAACAATTGGCTCTACTCTCCAA ATATCACGTGCATATTCACGTACTGTACGATCAGAGGAGAATTTCCCAGCAGCAGCTATA TTCATTAGAACCATTTTTGACCATCTTACTTCATCCTTATATGCTGATTCAACTTCAGCT TGAGCACGCATATAATCAGCATAATCTGCACATACCATAAATTTATCTTCTGTAACTAGT TTTTTATATAGGTCTTTAAATAAATCAGGTTCATTCGGACAGTAATAACCATCACGTATT TGATCTAAGCACAAACGAAGTTCTGGATTGGAAGATATATATCTCATTGGATTATACCCT GTTTTACGCAAATAATTGACTTCTTCAATAGTACGACCAAAGACAAATGCATTGGAGTGA CCAACTTCTTGAAATATTTCAATATTTGATCCATCCATCGTTCCAATAGTTAATGCACCG TTCAACATAAACTTCATATTCCCTGTTCCTGATGCTTCTGTACCAACACATGGAATTTGT TCAGATAAATCTGTTGCTGGTATAATACGTTCAGCCAAACTAACCCGATAATTTCGTAAA AATATAGTTTAAGTTTACCCGTTGTAATTGGATCAAAATCAATTATTCTTGCAACTGAAT TAATTAATTTTATATCATTTTAG



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)