Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6738 cluster # 6738       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6738#0 length = 1240 sequences # 4  

consensusID : consensus_6738#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1240
fasta sequence
                              [ATCACTAAAACTGATAGTACTATAAGGATCATTATAATTAGATAGAACATCTAAAATATTCGGATCTATACTTGGCCAAATATCCCGTAAGTAATTCTTTCCATTTGGAACTAAAGTAACTTGAGATTTAGTATGATTATTTGAAATAGTGGCTTGTTTGTCAATCTCTTCACTGATAACTGTTTTTTGTAATCTTAAGTTATGTTTACTCTCGCGTAAACGTAACGCTGGTGGTGGTGGACTAGAATTATCTTTATCCGAGTGATCACTATCATTTCCAGTTATATGTGTTTGACGGTTGACAAAATCATCATCCTCTTCTGGATCACCTTCAAACAGATAGTAATCACCTGACCGAAGCATTATATAATGTTCAGTAATATTAGTATTACTACGTCCAAATGCTTCTTGACGTTGTTGAATAAGATTGAGTTTCTGTTGTACTTTTGCCAAATTATATTGTTCTTCCATAGCTTGCTCATGAATAGCTAACATTAATTTACGGTTTATTAGGTAAGCACCACGAGATGCAAATCGACTTTGGACTTGTAAATCAAGTAATACATGACTAAAACTATGTGATGTGAACACTTTTCGTTGAAATATAATAAATATAAAGCATACAATATCCCAATGTAAACCACTTGAAACAGTAGCACATGATGTTTCATGTCCAGGAGGTAGATTGAAATGATTCCATGATAATGGATTCATACATTGAACACCGAACAACTGTATAAGCCAACATTGATTAGCCATTCGAGAACGATAGACACAACCCATAAGTTGAAGACTACATTTGGCCAAAATAACACAAAAATTATATCCAATAATCACATTCCATGAGTTGATTAGATTAGGTCGTTCTCTTAGCAAAACATTCAGTCCCATCCATAAATAGATGAAACTTAAGATCATATAGCCTAAGCAGAATAATGTGATCCATACAACTCCAGTGACAAGAACAACAGCTAAACTGACCCAATAGGACCAATAGAAAATAAGATGACGCATATAATCTAAATAAGATTCTTTAGTGCTGACGAAATCGCGATCTTCCTCGTTAGGTAATTCATTAGTTAAAATTGGACGGTTAGAACCACCATCATACCTTTCTGAATCAGGGCGTTGTTCAATCTTAAAGACACGAAATTGTAAAGCCACTGCAGCGAACTGAAAGAAGTCAGCAGTTAATTTATAAGCAGATGGTGCACCANAGTCACTAGGTAGATACAACCAC]

[-] EMBL CD198098             [ATCACTAAAACTGATAGTACTATAAGGATCATTATAATTAGATAGAACATCTAAAATATTCGGATCTATACTTGGCCAAATATCCCGTAAGTAATTCTTTCCATTTGGAACTAAAGTAACTTGAGATTTAGTATGATTATTTGAAATAGTGGCTTGTTTGTCAATCTCTTCACTGATAACTGTTTTTTGTAATCTTAAGTTATGTTTACTCTCGCGTAAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CD060216             [                                                                                   CCCGTAAGTAATTCTTTCCATTTGGAACTAAAGTAACTTGAGATTTAGTATGATTATTTGAAATAGTGGCTTGTTTGTCAATCTCTTCACTGATAACTGTTTTTTGTAATCTTAAGTTATGTTTACTCTCGCGTAAACGTAACGCTGGTGGTGGTGGACTAGAATTATCTTTATCCGAGTGATCACTATCATTTCCAGTTATATGTGTTTGACGGTTGACAAAATCATCATCCTCTTCTGGATCACCTTCAAACAGATAGTAATCACCTGACCGAAGCATTATATAATGTTCAGTAATATTAGTATTACTACGTCCAAATGCTTCTTGACGTTGTTGAATAAGATTGAGTTTCTGTTGTACTTTTGCCAAATTATATTGTTCTTCCATAGCTTGCTCATGAATAGCTAACATTAATTTACGGTTTATTAGGTAAGCACCACGAGATGCAAATCGACTTTGGACTTGTAAATCAAGTAATACATGACTAAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CD094388             [                                                                                                                                                                                                                                              GGACTAGAATTATCTTTATCCGAGTGATCACTATCATTTCCAGTTATATGTGTTTGACGGTTGACAAAATCATCATCCTCTTCTGGATCACCTTCAAACAGATAGTAATCACCTGACCGAAGCATTATATAATGTTCAGTAATATTAGCATTACTACGTCCAAATGCTTCTTGACGTTGTTGAATAAGATTGAGTTTCTGTTGTACTTTTGCCAAATTATATTGTTCTTCCATAGCTTGTTCATGAATAGCTAACATTAATTTACGGTTTATTAGGTAAGCACCACGAGATGCAAATCGACTTTGGACTTGTAAATCAAGTAATACATGACTAAAACTATGTGATGTGAACACTTTTCGTTGAAATATAATAAATATAAAGCATACAATATCCCAATGTAAACCACTTGAAACAGTAGCACATGATGTTTCATGTCCAGGAGGTAGATTGAAATGATTCCATGATAATGGATTCATACATTGAACACCGAACAACTGTATAAGCCAACATTGATTAGCCATTCGAGAACGATAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CD132806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAATGATTCCATGATAATGGATTCATACATTGAACACCGAACAACTGTATAAGCCAACATTGATTAGCCATTCGAGAACGATAGACACAACCCATAAGTTGAAGACTACATTTGGCCAAAATAACACAAAAATTATATCCAATAATCACATTCCATGAGTTGATTAGATTAGGTCGTTCTCTTAGCAAAACATTCAGTCCCATCCATAAATAGATGAAACTTAAGATCATATAGCCTAAGCAGAATAATGTGATCCATACAACTCCAGTGACAAGAACAACAGCTAAACTGACCCAATAGGACCAATAGAAAATAAGATGACGCATATAATCTAAATAAGATTCTTTAGTGCTGACGAAATCGCGATCTTCCTCGTTAGGTAATTCATTAGTTAAAATTGGACGGTTAGAACCACCATCATACCTTTCTGAATCAGGGCGTTGTTCAATCTTAAAGACACGAAATTGTAAAGCCACTGCAGCGAACTGAAAGAAGTCAGCAGTTAATTTATAAGCAGATGGTGCACCANAGTCACTAGGTAGATACAACCAC]


>consensus_6738#0 ATCACTAAAACTGATAGTACTATAAGGATCATTATAATTAGATAGAACATCTAAAATATT CGGATCTATACTTGGCCAAATATCCCGTAAGTAATTCTTTCCATTTGGAACTAAAGTAAC TTGAGATTTAGTATGATTATTTGAAATAGTGGCTTGTTTGTCAATCTCTTCACTGATAAC TGTTTTTTGTAATCTTAAGTTATGTTTACTCTCGCGTAAACGTAACGCTGGTGGTGGTGG ACTAGAATTATCTTTATCCGAGTGATCACTATCATTTCCAGTTATATGTGTTTGACGGTT GACAAAATCATCATCCTCTTCTGGATCACCTTCAAACAGATAGTAATCACCTGACCGAAG CATTATATAATGTTCAGTAATATTAGTATTACTACGTCCAAATGCTTCTTGACGTTGTTG AATAAGATTGAGTTTCTGTTGTACTTTTGCCAAATTATATTGTTCTTCCATAGCTTGCTC ATGAATAGCTAACATTAATTTACGGTTTATTAGGTAAGCACCACGAGATGCAAATCGACT TTGGACTTGTAAATCAAGTAATACATGACTAAAACTATGTGATGTGAACACTTTTCGTTG AAATATAATAAATATAAAGCATACAATATCCCAATGTAAACCACTTGAAACAGTAGCACA TGATGTTTCATGTCCAGGAGGTAGATTGAAATGATTCCATGATAATGGATTCATACATTG AACACCGAACAACTGTATAAGCCAACATTGATTAGCCATTCGAGAACGATAGACACAACC CATAAGTTGAAGACTACATTTGGCCAAAATAACACAAAAATTATATCCAATAATCACATT CCATGAGTTGATTAGATTAGGTCGTTCTCTTAGCAAAACATTCAGTCCCATCCATAAATA GATGAAACTTAAGATCATATAGCCTAAGCAGAATAATGTGATCCATACAACTCCAGTGAC AAGAACAACAGCTAAACTGACCCAATAGGACCAATAGAAAATAAGATGACGCATATAATC TAAATAAGATTCTTTAGTGCTGACGAAATCGCGATCTTCCTCGTTAGGTAATTCATTAGT TAAAATTGGACGGTTAGAACCACCATCATACCTTTCTGAATCAGGGCGTTGTTCAATCTT AAAGACACGAAATTGTAAAGCCACTGCAGCGAACTGAAAGAAGTCAGCAGTTAATTTATA AGCAGATGGTGCACCANAGTCACTAGGTAGATACAACCAC



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)