Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 674 cluster # 674       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_674#0 length = 1150 sequences # 2  

consensusID : consensus_674#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1150
fasta sequence
                              [CACATTCTTATTTATTATATATATATATATATATATATATATATATATATATGACGAATAATTAACGATAATAATAATAATAAGAGAAATCCTGTTAAAGAAACATCATACAAATTTGATCGAAGAAAAAAATAGTATTGCAGAAATAAACAAACAAGTACACACACACACGCACACTAACTCACACAGATGAATATAAACATATCAACATAAAAAACAAAAAAAAAGATGAGAATCATGACAACAACCATTTATCAATAATTCTTTCTTTTTATTAAAGAGAAAAGAAGAAAGGATGAAAAAAAAATAGATTTACATCTTTTCTATAATCAGTTTACAATGATGGAATTCATTGGTTGGCTTTTTATACAAATTAACGGGGAGTGGGTGGGTGGTGGGTAAATTCAAACACACACACACACACATACACACAAATGAATCATTATAAGACAAAGAGAACAAAAAGGTGTAAAATTTGGCTTTAAAAATAAGAAAAGTGAATTAAAACCTGCATGGGATAATTTCCTTTCTATTTTATGTAAGCAAATATACATTACATGAATATATATACTACTTATAAAACTATTGAAAACAAAATATCATTTTGTGCTTACTAGTGTTCTCGTC-ACGAAT-TATATATAAATATATACATGTATAGAGTAGTGTGTATACACAGCACAATGCACACACACACACGCACACAACACACCCACACACACATACGTATAAACACGATGAATGTAAAACTTGAACACTACACTGTACAAATTATATTTTGAATTCTATAAAATAGTAAAACGAGAAAACACAAAGCACACAATCTATACTCAATAACAAATACATGTGTATAATTAAAGTTGACATTGAACTGGTTTATCCATTGTATTGTATTGTGTTTTGTATAAGTGTATATGCGTATATGCGTGTGTGTGTGTTGTGTATGTTACATGTTTGTATGTGTTGGCATTGGTTTTTCTAATCACACAGTATGTGTTCATACACAATTGCATTGAATATATATTGGCACATAGTGAGTATGATGGAGATAGCCATGAAGAAAAAATAGAGAGACGCAGAGGGTATTTCTTTATTTCTATTGAATCAAAAAAATGAATTGTAGGCACTCACTTTATATTTTCATAAGTCAATA]

[+] EMBL CD075144             [CACATTCTTATTTATTATATATATATATATATATATATATATATATATATATGACGAATAATTAACGATAATAATAATAATAAGAGAAATCCTGTTAAAGAAACATCATACAAATTTGATCGAAGAAAAAAATAGTATTGCAGAAATAAACAAACAAGTACACACACACACGCACACTAACTCACACAGATGAATATAAACATATCAACATAAAAAACAAAAAAAAAGATGAGAATCATGACAACAACCATTTATCAATAATTCTTTCTTTTTATTAAAGAGAAAAGAAGAAAGGATGAAAAAAAAATAGATTTACATCTTTTCTATAATCAGTTTACAATGATGGAATTCATTGGTTGGCTTTTTATACAAATTAACGGGGAGTGGGTGGGTGGTGGGTAAATTCAAACACACACACACACACATACACACAAATGAATCATTATAAGACAAAGAGAACAAAAAGGTGTAAAATTTGGCTTTAAAAATAAGAAAAGTGAATTAAAACCTGCATGGGATAATTTCCTTTCTATTTTATGTAAGCAAATATACATTACATGAATATATATACTACTTATAAAACTATTGAAAACAAAATATCATTTTGTGCTTACTAGTGTTCTCGTC ACGAAT TATATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CD081312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTATGTAAGCAAATATACATTACATGAATATATATACTACTTATAAAACTATTGAAAACAAAATATCATTTTGTGCTTACTAGTGTTCTCGTCAACGAATATATATATAAATATATACATGTATAGAGTAGTGTGTATACACAGCACAATGCACACACACACACGCACACAACACACCCACACACACATACGTATAAACACGATGAATGTAAAACTTGAACACTACACTGTACAAATTATATTTTGAATTCTATAAAATAGTAAAACGAGAAAACACAAAGCACACAATCTATACTCAATAACAAATACATGTGTATAATTAAAGTTGACATTGAACTGGTTTATCCATTGTATTGTATTGTGTTTTGTATAAGTGTATATGCGTATATGCGTGTGTGTGTGTTGTGTATGTTACATGTTTGTATGTGTTGGCATTGGTTTTTCTAATCACACAGTATGTGTTCATACACAATTGCATTGAATATATATTGGCACATAGTGAGTATGATGGAGATAGCCATGAAGAAAAAATAGAGAGACGCAGAGGGTATTTCTTTATTTCTATTGAATCAAAAAAATGAATTGTAGGCACTCACTTTATATTTTCATAAGTCAATA]


>consensus_674#0 CACATTCTTATTTATTATATATATATATATATATATATATATATATATATATGACGAATA ATTAACGATAATAATAATAATAAGAGAAATCCTGTTAAAGAAACATCATACAAATTTGAT CGAAGAAAAAAATAGTATTGCAGAAATAAACAAACAAGTACACACACACACGCACACTAA CTCACACAGATGAATATAAACATATCAACATAAAAAACAAAAAAAAAGATGAGAATCATG ACAACAACCATTTATCAATAATTCTTTCTTTTTATTAAAGAGAAAAGAAGAAAGGATGAA AAAAAAATAGATTTACATCTTTTCTATAATCAGTTTACAATGATGGAATTCATTGGTTGG CTTTTTATACAAATTAACGGGGAGTGGGTGGGTGGTGGGTAAATTCAAACACACACACAC ACACATACACACAAATGAATCATTATAAGACAAAGAGAACAAAAAGGTGTAAAATTTGGC TTTAAAAATAAGAAAAGTGAATTAAAACCTGCATGGGATAATTTCCTTTCTATTTTATGT AAGCAAATATACATTACATGAATATATATACTACTTATAAAACTATTGAAAACAAAATAT CATTTTGTGCTTACTAGTGTTCTCGTCACGAATTATATATAAATATATACATGTATAGAG TAGTGTGTATACACAGCACAATGCACACACACACACGCACACAACACACCCACACACACA TACGTATAAACACGATGAATGTAAAACTTGAACACTACACTGTACAAATTATATTTTGAA TTCTATAAAATAGTAAAACGAGAAAACACAAAGCACACAATCTATACTCAATAACAAATA CATGTGTATAATTAAAGTTGACATTGAACTGGTTTATCCATTGTATTGTATTGTGTTTTG TATAAGTGTATATGCGTATATGCGTGTGTGTGTGTTGTGTATGTTACATGTTTGTATGTG TTGGCATTGGTTTTTCTAATCACACAGTATGTGTTCATACACAATTGCATTGAATATATA TTGGCACATAGTGAGTATGATGGAGATAGCCATGAAGAAAAAATAGAGAGACGCAGAGGG TATTTCTTTATTTCTATTGAATCAAAAAAATGAATTGTAGGCACTCACTTTATATTTTCA TAAGTCAATA



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)