Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6828 cluster # 6828       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6828#0 length = 1098 sequences # 4  
consensusID : consensus_6828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1098
fasta sequence 
                              [AAATTAAACCTCTTTTGGTGGAATCAACACATCAAGAGCAGTGTTTGTGCGTCTTTTCGCTAATTTCTTTTTTGTTACTAAAGCTTCACTGGGTCTTGACAATGTGCTTATATCATTAACGTTTTTGTAAGAAACTTTTCGTCGTAACTTCTCTTCTGCTTCTCGTACACCTAAAGCTTCTTTGATAGTAAACATTTTACGTTCAAAGTGTATATTTTGTTTTTTCGCCTCAATGCGGCCTGGTTTTGATCTACCTTTTTGTTTATTTCGTTTAATAGTAGGTGTATCGACTTTGGGAATTTGTCCAAGCAACGCAGCCTTCTTCTTTTCCCATTCTTCTAAAAGGTCTTCCCGACGAACTTCACCAACGATTGGTTTTAATGAAATCATTGTATACGGAATCTTATCCAAAAGTCGTTTAACTTCCCTTTCTTGCCTATAACGTTTATTGGCAAAAGGATTTTCTTCTAAAGCATCATAATTAGGTTCGGCGCTACCAGGACAAAGAATGGATGAAATCCCAGCGGAACTACCTACCCCTAAAACATCTTCATAAGGACAAAAGCGTACATGATGAACTGGATAAACAGCATAGTGAGAAAGATAAGCATTTGAAAGTACTCGTCGGTTAACATTAGGTGAAATGATTTCGAAGATTTTTGATGTATTGGACGGTGGAATGGAATGGGGATCACGTAAAACCTGTACGGTATTAGCGGCACCCAATGCTAATAAACCTTTCTGACTGAAATTAATTGTTGAAGCAGATATAGATAGCGAGATTTCGGAAAGAGGGTCATAGGAGGATCTCAAATCCCAAATCTTTAGTTTTCGGTCAACTCCACAAGTTGCCAAGTAGCTTCCAGTTTGATCGCAGGCTATTGAAGTAATGGCAGTTGGGTGTGCGAACATTTTGACAACGTATGACTTCTCTGAAGGTACCCACATAGATACAACACCATCGTTGTGCCCTGTGCAAATAACTCCGTTGGAAGGGTTTTGACACATGACACCAAGGCGCCCCATATATGTAGGTATTGAAGTAACAATTGTACCAATTGAGCAGTCTAGGTAGTAAAGAAATCCATGTCAGCAGAG]

[+] EMBL CD076972             [AAATTAAACCTCTTTTGGTGGAATCAACACATCAAGAGCAGTGTTTGTGCGTCTTTTCGCTAATTTCTTTTTTGTTACTAAAGCTTCACTGGGTCTTGACAATGTGCTTATATCATTAACGTTTTTGTAAGAAACTTTTCGTCGTAACTTCTCTTCTGCTTCTCGTACACCTAAAGCTTCTTTGATAGTAAACATTTTACGTTCAAAGTGTATATTTTGTTTTTTCGCCTCAATGCGGCCTGGTTTTGATCTACCTTTTTGTTTATTTCGTTTAATAGTAGGTGTATCGACTTTGGGAATTTGTCCAAGCAACGCAGCCTTCTTCTTTTCCCATTCTTCTAAAAGGTCTTCCCGACGAACTTCACCAACGATTGGTTTTAATGAAATCATTGTATACGGAATCTTATCCAAAAGTCGTTTAACTTCCCTTTCTTGCCTATAACGTTTATTGGCAAAAGGATTTTCTTCTAAAGCATCATAATTAGGTTCGGCGCTACCAGGACAAAGAATGGATGAAATCCCAGCGGAACTACCTACCCCTAAAACATCTTCATAAGGACAAAAGCGTACATGATGAACTGGATAAACAGCATAGTGAGAAAGATAAGCATTTGAAAGTACTCGTCGGTTAACATTAGGTGAAATGATTTCGAAGATTTTTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CD076597             [AAATTAAACTTCTTTTGGTGGAATCAACACATCAAGAGCAGTGTTTGTGCGTCTTTTCGCTAATTTCTTTTTTGTTACTAAAGCTTCACTGGGTCTTGACAATGTGCTTATATCATTAACGTTTTTGTAAGAAACTTTTCGTCGTAACTTCTCTTCTGCTTCTCGTACACCTAAAGCTTCTTTGATAGTAAACATTTTACGTTCAAAGTGTATATTTTGTTTTTTCGCCTCAATGCGGCCTGGTTTTGATCTACCTTTTTGTTTATTTCGTTTAATAGTAGGTGTATCGACTTTGGGAATTTGTCCAAGCAACGCAGCCTTCTTCTTTTCCCATTCTTCTAAAAGGTCTTCCCGACGAACTTCACCAACGATTGGTTTTAATGAAATCATTGTATACGGAATCTTATCCAAAAGTCGTTTAACTTCCCTTTCTTGCCTATAACGTTTATTGGCAAAAGGATTTTCTTCTAAAGCATCATAATTAGGTTCGGCGCTACCAGGACAAAGAATGGATGAAATCCCAGCGGAACTACCTACCCCTAAAACATCTTCATAAGGACAAAAGCGTACATGATGAACTGGATAAACAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CD158764             [                                                                                                                                                                                                                                                          CTACCTTTTTGTTTATTTCGTTTAATAGTAGGTGTATCGACTTTGGGAGTTTGTCCAAGCAACGCAGCCTTCTTCTTTTCCCATTCTTCTAAAAGGTCTTCCCGGCGAACTTCACCAACGATTGGTTTTAATGAAATCATTGTATACGGAATCTTATCCAAAAGTCGTTTAACTTCCCTTTCTTGCCTATAACGTTTATTGGCAAAAGGATTTTCTTCTAAAGCATCATAATTAGGTTCGGCGCTACCAGGACAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CD083012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGGAACTACCTACCCNTANAACATCTTCATAAGGACAANAGCGTACATGATGAACTGGATAAACAGCATAGTGAGAAAGATAAGCATTTGAAAGTACTCGTCGGTTAACATTAGGTGAAATGATTTCGAAGATTTTTGATGTATTGGACGGTGGAATGGAATGGGGATCACGTAAAACCTGTACGGTATTAGCGGCACCCAATGCTAATAAACCTTTCTGACTGAAATTAATTGTTGAAGCAGATATAGATAGCGAGATTTCGGAAAGAGGGTCATAGGAGGATCTCAAATCCCAAATCTTTAGTTTTCGGTCAACTCCACAAGTTGCCAAGTAGCTTCCAGTTTGATCGCAGGCTATTGAAGTAATGGCAGTTGGGTGTGCGAACATTTTGACAACGTATGACTTCTCTGAAGGTACCCACATAGATACAACACCATCGTTGTGCCCTGTGCAAATAACTCCGTTGGAAGGGTTTTGACACATGACACCAAGGCGCCCCATATATGTAGGTATTGAAGTAACAATTGTACCAATTGAGCAGTCTAGGTAGTAAAGAAATCCATGTCAGCAGAG]




>consensus_6828#0
AAATTAAACCTCTTTTGGTGGAATCAACACATCAAGAGCAGTGTTTGTGCGTCTTTTCGC
TAATTTCTTTTTTGTTACTAAAGCTTCACTGGGTCTTGACAATGTGCTTATATCATTAAC
GTTTTTGTAAGAAACTTTTCGTCGTAACTTCTCTTCTGCTTCTCGTACACCTAAAGCTTC
TTTGATAGTAAACATTTTACGTTCAAAGTGTATATTTTGTTTTTTCGCCTCAATGCGGCC
TGGTTTTGATCTACCTTTTTGTTTATTTCGTTTAATAGTAGGTGTATCGACTTTGGGAAT
TTGTCCAAGCAACGCAGCCTTCTTCTTTTCCCATTCTTCTAAAAGGTCTTCCCGACGAAC
TTCACCAACGATTGGTTTTAATGAAATCATTGTATACGGAATCTTATCCAAAAGTCGTTT
AACTTCCCTTTCTTGCCTATAACGTTTATTGGCAAAAGGATTTTCTTCTAAAGCATCATA
ATTAGGTTCGGCGCTACCAGGACAAAGAATGGATGAAATCCCAGCGGAACTACCTACCCC
TAAAACATCTTCATAAGGACAAAAGCGTACATGATGAACTGGATAAACAGCATAGTGAGA
AAGATAAGCATTTGAAAGTACTCGTCGGTTAACATTAGGTGAAATGATTTCGAAGATTTT
TGATGTATTGGACGGTGGAATGGAATGGGGATCACGTAAAACCTGTACGGTATTAGCGGC
ACCCAATGCTAATAAACCTTTCTGACTGAAATTAATTGTTGAAGCAGATATAGATAGCGA
GATTTCGGAAAGAGGGTCATAGGAGGATCTCAAATCCCAAATCTTTAGTTTTCGGTCAAC
TCCACAAGTTGCCAAGTAGCTTCCAGTTTGATCGCAGGCTATTGAAGTAATGGCAGTTGG
GTGTGCGAACATTTTGACAACGTATGACTTCTCTGAAGGTACCCACATAGATACAACACC
ATCGTTGTGCCCTGTGCAAATAACTCCGTTGGAAGGGTTTTGACACATGACACCAAGGCG
CCCCATATATGTAGGTATTGAAGTAACAATTGTACCAATTGAGCAGTCTAGGTAGTAAAG
AAATCCATGTCAGCAGAG

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)