Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6871 cluster # 6871       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6871#0 length = 819 sequences # 4  

consensusID : consensus_6871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 819
fasta sequence
                              [CTCGAGGCCAAAAATTCGGCACGAGGGAAATACGAAACTTGATTGAACGGGTTCAGTCCCTTGTTGATAATGTAAAAAATAAACACAGTGACATATTGTCTTCGCCTAATCAAGACGAAGCTACAAAGGCTCAACTTGAAGATGCTATGGCCGAAATTAAGACAATCGCACACAGGGTGCGTGCAAAACTAAAGCAGATGGAAATGAACATTGAATATGATGAAAACTCTGACAGGACATCAGCGGATTTACGGATAAGAAAAACTCAGTATTCCACAATTTCTCGGAACTTCATTGAAGTTATGACCGACTACAACAAAGCTCAAGTTGCTTTCCGAGACGCCTGCAAAAACCGAATAAAGAGACAAATGGAGATCGCTGAGAGAAAAATTTCTAATGAAGAATTGGAGGATATGTTAGAATCTGGGAATCCTGCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAACAGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTAAGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAAAGTCAGGGTGAAATGATTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCGACACAAAGAAAGCTGTTAAATATCAAAGTTCAGCTCGGAAG-AAAATGATTATTATCGGTATTTGTGTGGCGATTCTTATTTGTATTATTGTTGGAACGATTGTTGGTATGGTGCCAGGAATATGAAAAGTTACCTGAAAAATAAATTATCTATTATTAT]

[+] EMBL CD079991             [CTCGAGGCCAAAAATTCGGCACGAGGGAAATACGAAACTTGATTGAACGGGTTCAGTCCCTTGTTGATAATGTAAAAAATAAACACAGTGACATATTGTCTTCGCCTAATCAAGACGAAGCTACAAAGGCTCAACTTGAAGATGCTATGGCCGAAATTAAGACAATCGCACACAGGGTGCGTGCAAAACTAAAGCAGATGGAAATGAACATTGAATATGATGAAAACTCTGACAGGACATCAGCGGATTTACGGATAAGAAAAACTCAGTATTCCACAATTTCTCGGAACTTCATTGAAGTTATGACCGACTACAACAAAGCTCAAGTTGCTTTCCGAGACGCCTGCAAAAACCGAATAAAGAGACAAATGGAGATCGCTGAGAGAAAAATTTCTAATGAAGAATTGGAGGATATGTTAGAATCTGGGAATCCTGCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAACAGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTAAGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAAAGTCAGGGTGAAATGATTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCGACACAAAGAAAGCTGTTAAATATCAAAGTTCAag                                                                                                                              ]
[+] EMBL CD133498             [                                                                                                                                                                                                                                                                           AGTATTCCACAATTTCTCGGAACTTCATTGAAGTTATGACCGACTACAACAAAGCTCAAGTTGCTTTCCGAGACGCCTGCAAAAACCGAATAAAGAGACAAATGGAGATCGCTGAGAGAAAAATTTCTAATGAAGAATTGGAGGATATGTTGGAATCTGGGAATCCTGCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAACAGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTAAGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAGAGTCAGGGTGAAATGATTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCGACACAAAGAAAGCTGTTAAATATCAAAGTTCAGCTCGGAAG AAGATGATTATTATCGGTATTTGTGTGGCGATTCTTATTTGTATTATTGTTGGAACGATTGT                                                        ]
[+] EMBL CD196739             [                                                                                                                                                                                                                                                                                                                                                                                     GATCGCTGAGAGAAAAATTTCTAATGAAGAATTGGAGGATATGTTAGAATCTGGGAATCCTGCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAACAGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTAAGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAAAGTCAGGGTGAAATGATTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCGACACAAAGAAAGCTGTTAAATATCAAAGTTCAGCTCGGAAG AAAATGATTATTATCGGTATTTGTGTGGCGATTCTTATTTGTATTATTGTTGGAACGATTGTTGGTATGGTGCCAGGAATATGAAAAGTTACCTGAAAAATAAATTATCTATTATTAT]
[+] EMBL CD078018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAACAGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTAAGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAAAGTCAGGGTGAAATGATTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCGACACAAAGAAAGCTGTTAAATATCAAAGTTCAGCTCGGAAGAAAAATGA TATTATCG                                                                                                      ]


>consensus_6871#0 CTCGAGGCCAAAAATTCGGCACGAGGGAAATACGAAACTTGATTGAACGGGTTCAGTCCC TTGTTGATAATGTAAAAAATAAACACAGTGACATATTGTCTTCGCCTAATCAAGACGAAG CTACAAAGGCTCAACTTGAAGATGCTATGGCCGAAATTAAGACAATCGCACACAGGGTGC GTGCAAAACTAAAGCAGATGGAAATGAACATTGAATATGATGAAAACTCTGACAGGACAT CAGCGGATTTACGGATAAGAAAAACTCAGTATTCCACAATTTCTCGGAACTTCATTGAAG TTATGACCGACTACAACAAAGCTCAAGTTGCTTTCCGAGACGCCTGCAAAAACCGAATAA AGAGACAAATGGAGATCGCTGAGAGAAAAATTTCTAATGAAGAATTGGAGGATATGTTAG AATCTGGGAATCCTGCCATTTTTACACAAGAAATCATGACGGATACGCAACAAGCAAAAC AGTCTCTGGCAGATATTGAAGCTCGACATCAAGACATTATGAAACTCGAAAAGAGTATTA AGGAGTTACATGATATGTTCATGGACATGGCAATGCTTGTTGAAAGTCAGGGTGAAATGA TTGATCGAATCGAATACAATGTAGAACAAGCGGTGGATTATATTGAAAGTGCAAAAGCCG ACACAAAGAAAGCTGTTAAATATCAAAGTTCAGCTCGGAAGAAAATGATTATTATCGGTA TTTGTGTGGCGATTCTTATTTGTATTATTGTTGGAACGATTGTTGGTATGGTGCCAGGAA TATGAAAAGTTACCTGAAAAATAAATTATCTATTATTAT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)