Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6878 cluster # 6878       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6878#0 length = 624 sequences # 4  
consensusID : consensus_6878#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 624
fasta sequence 
                              [CGATTCGAAAATATGATCTCGTAGGAAATTCGTTCGTTTAGAAATGGTGGCTTTATAAAATTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCTAATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTTATTTTGCATTTGTGGACTAATCGTTGGGATCATATTGCTATTTTATATATTGTCGCCATATAGTCCGACATGTTTACTTAGAAGCTGTATCCACAAACAGTATGACCGTACAGGCTTTCTGCATTCTGTTCAAACTACAAAAAGAAATAATTATTTGATGAGATATACGAGAGATAATTCTAGTAATGTGTCTGTGCTCGTCTTCATCCATATTCAGAAAACTGCCGGTACACTTTTAGAACGTCGTTTGGTTAAAGATGGTCTGGTGGGCAAAACATGTTACTGTTTTTTCAGAAGACGCTGTAGTTGTAAAACGCCAAATGGTAATACTTGGCTTGTCAGCAGGTATTCTACAGGCTGNGTATGTGGACTCCATGCTGACTTGACTGAATTAACGGAATGTATTGACAACAAACTGAACAAAGTTGACCACCATATTATAAA]

[+] EMBL CD078238             [CGATTCGAAAATATGATCTCGTAGGAAATTCGTTCGTTTAGAAATGGTGGCTTTATAAAATTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCTAATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTTATTTTGCATTTGTGGACTAATCGTTGGGATCATATTGCTATTTTATATATTGTCGCCATATAGTCCGACATGTTTACTTAGAAGCTGTATCCACAAACAGTATGACCGTACAGGCTTTCTGCATTCTGTTCAAACTACAAAAAGAAATAATTATTTGATGAGATATACGAGAGATAATTCTAGTAATGTGTCTGTGCTCGTCTTCATCCATATTCAGAAAACTGCCGGTACACTTTTAGAACGTCGTTTGGTTAAAGATGGTCTGGTGGGCAAAACATGTTACTGTTTTTTCAGAAGACGCTGTAGTTGTAAAACGCCAAATGGTAATACTTGGCTTGTCAGCAGGTATTCTACAGGCTGNGTATGTGGACTCCATGCTGACTTGACTGAATTAACGGAATGTATTGACAACAAACTGAACAAAGTTGACCACCATATTATAAA]
[+] EMBL CD078316             [CGATTCGAAAATATGATCTCGTAGGAAATTCGTTCGTTTAGAAATGGTGGCTTTATAAAATTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCTAATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTTATTTTGCATTTGTGGACTAATCGTTGGGATCATATTGCTATTTTATATATTGTCGCCATATAGTCCGACATGTTTACTTAGAAGCTGTATCCACAAACAGTATGACCGTACAGGCTTTCTGCATTCTGTTCAAACTACAAAAAGAAATAATTATTTGATGAGATATACGAGAGATAATTCTAGTAATGTGTCTGTGCTCGTCTTCATCCATATTCAGAAAACTGCCGGTACACTTTTAGAACGTCGTTTGGTTAAAGATGGTCTGGTGGGCAAAACATGTT                                                                                                                                                                   ]
[+] EMBL CD196257             [            ATGATCTCGTAGGAAATTCGTTCGTTTAGAAATGGTGGC TTATAAAATTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCTAATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTTATTTTGCATTTGTGGACTAATCGTTGGGATCATATTGCTATTTTATATATTGTCGCCATATAGTCCGACATGTTTACTTAG                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL SM58053              [                                                          AATTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCTAATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTTATTTTGCATTTGTGGACTAATCcgt                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_6878#0
CGATTCGAAAATATGATCTCGTAGGAAATTCGTTCGTTTAGAAATGGTGGCTTTATAAAA
TTTCAAATTATGTCAGGTTGGATTTCCAAGCTCAGATTTCGATTGCGTGTGGTGATCCCT
AATTTACATCTAATCTTGATCAAATCATTTATGTGATTCATACATGAAGGAGGATAAGTT
ATTTTGCATTTGTGGACTAATCGTTGGGATCATATTGCTATTTTATATATTGTCGCCATA
TAGTCCGACATGTTTACTTAGAAGCTGTATCCACAAACAGTATGACCGTACAGGCTTTCT
GCATTCTGTTCAAACTACAAAAAGAAATAATTATTTGATGAGATATACGAGAGATAATTC
TAGTAATGTGTCTGTGCTCGTCTTCATCCATATTCAGAAAACTGCCGGTACACTTTTAGA
ACGTCGTTTGGTTAAAGATGGTCTGGTGGGCAAAACATGTTACTGTTTTTTCAGAAGACG
CTGTAGTTGTAAAACGCCAAATGGTAATACTTGGCTTGTCAGCAGGTATTCTACAGGCTG
NGTATGTGGACTCCATGCTGACTTGACTGAATTAACGGAATGTATTGACAACAAACTGAA
CAAAGTTGACCACCATATTATAAA

clustalw multiple alignements is not computed in this case
Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)