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These datas are free for academic use only, please contact me for any other use.

Schistosoma mansoni
cluster # 6903 cluster # 6903       Sequences # 4       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6903#0 length = 890 sequences # 4  

consensusID : consensus_6903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 890
fasta sequence
                              [CCTCGGAGCCAAGNATTCGGCACGAGGAGGACAGGCTCGAAAAAATGTCAATCGATATTTTAGAAACTTTTGAGTTGCTTAATGCAACTGCTATAAATCTCTTGTGCGTTCTTAAAGGCGGGTTCAAGTTTGCATCCGATCTAAGTGAAAAAATACATAACAGCGCAGTTACACGAAGTAAAAGTATACCCATCTTCATGGACTTCATTGTTTCTAGCACATACGAGAACGATATCGTAGGGCATGAACCTCAATTTCATACTTACACTAACTTGACATCGTTTAAAGACAAGGATGTTCTCATAGTTGAGGATTTACTTGACTCAGGCACTACTCTCAGCAGACTGGTTCCTTATATTAAATCTTTTGAACCTCGTTCCGTACTTGTTGCTTGTTTGTTGGTAAAAAGAAAACAAAACTGTTCCGAGTTCCAACCAGATTTTGTTGGTTTCGAAGTTCCAAATCGGTTCATTGTTGGGTATGCTATCGACTACAATGACTTTTTTCGGGATATACCACATATATGTTCAATAAATGATGAAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTAAATAATAAATCCATTTAATGATGATTAAAATGAAGTACACAATTCGGAACTTGATTTTCTTTATCTCTATAGTACTATAGTATTTTCAATACAATTCAACTTTATTTAGATAAACGTTTGGGATTCCTAATAGATTTATTCTATCTTATCTAATTATTCCCTTGTATACTGTTACATATTTTTTTGAAAGAGATCAACTATTTTTTTTGTTTTTTTTTCCTTTAAGGTATGTATATTCAGTAAAGAACAGAGTAGTTTAAATAATTGTAAACTTATATTACTGTACAGTATGTTATACACTAGT]

[+] EMBL CD079644             [CCTCGGAGCCAAGNATTCGGCACGAGGAGGACAGGCTCGAAAAAATGTCAATCGATATTTTAGAAACTTTTGAGTTGCTTAATGCAACTGCTATAAATCTCTTGTGCGTTCTTAAAGGCGGGTTCAAGTTTGCATCCGATCTAAGTGAAAAAATACATAACAGCGCAGTTACACGAAGTAAAAGTATACCCATCTTCATGGACTTCATTGTTTCTAGCACATACGAGAACGATATCGTAGGGCATGAACCTCAATTTCATACTTACACTAACTTGACATCGTTTAAAGACAAGGATGTTCTCATAGTTGAGGATTTACTTGACTCAGGCACTACTCTCAGCAGACTGGTTCCTTATATTAAATCTTTTGAACCTCGTTCCGTACTTGTTGCTTGTTTGTTGGTAAAAAGAAAACAAAACTGTTCCGAGTTCCAACCAGATTTTGTTGGTTTCGAAGTTCCAAATCGGTTCATTGTTGGGTATGCTATCGACTACAATGACTTTTTTCGGGATATACCACATATATGTTCAATAAATGATGAAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTAAATAATAAATCCATTTAATGATGATTAAAATGAAGTACACAATTCGGAACTTGATTNTCTNTATCTCTATAGTAC                                                                                                                                                                                                                                     ]
[+] EMBL CD083845             [                                                                                                                             gAGTTTGCATCCGATCTAAGTGAAAAAATACATAACAGCGCAGTTACACGAAGTAAAAGTATACCCATCTTCATGGACTTCATTGTTTCTAGCACATACGAGAACGATATCGTAGGGCATGAACCTCAATTTCATACTTACACTAACTTGACATCGTTTAAAGACAAGGATGTTCTCATAGTTGAGGATTTACTTGACTCAGGCACTACTCTCAGCAGACTGGTTCCTTATATTAAATCCTTTGAACCTCGTTCCGTACTTGTTGCTTGTTTGTTGGTAAAAAGAAAACAAAACTGTTCCGAGTTCCAACCAGATTTTGTTGGTTTCGAAGTTCCAAATCGGTTCATTGTTGGGTATGCTATCGACTACAATGACTTTTTTCGGGATATACCACATATATGTTCAATAAATGATGAAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTCAATAATAAATCCATTTAATGATGAT                                                                                                                                                                                                                                                                                       ]
[-] EMBL AI067623             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTTTTTCGGGATATACCACATATATGTTCAATAAATGATGAAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTAAATAATAAATCCATTTAATGATGATTAAAATGAAGTACACAATTCGGAACTTGATTTTCTTTATCTCTATAGTACTATAGTATTTTCAATACAATTCAACTTTATTTAGATAAACGTTTGGGATTCCTAATAGATTTATTCTATCTTATCTAATTATTCCCTTGTATACTGTTACATATTTTTTTGAAAGAGATCAACTATTTTTTTTGTTTTTTTTTCCTTTAAGGTATGTATATTCAGTAAAGAACAGAGTAGTTTAAATAATTGTAAACTTATATTACTGTACAGTATGTTATACACTAGT]
[-] EMBL AI067655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TTCGGGATATACCACATATATGTTCAGTAAATGATGAAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTAAATAATAAATCCATTTAATGATGATTAAAATGAAGTACACAATTCGGAACTTGATTTTCTTTATCTCTATAGTACTATAGTATTTTCAATACAATTCAACTTTATTTAGATAAACGTTTGGGATTCCTAATAGATTTATTCTATCTTATCTAATTATTCCCTTGTATACTGTTACATATTTTTTTGAAAGAGATCAACTATTTTTTTTGTTTTTTTTTCCTTTAAGGTATGTATATTCAGTAAAGAACAGAGTAGTTTAAATAATTGTAAACTTATATTACTGTACAGTATGTTATACAC    ]


>consensus_6903#0 CCTCGGAGCCAAGNATTCGGCACGAGGAGGACAGGCTCGAAAAAATGTCAATCGATATTT TAGAAACTTTTGAGTTGCTTAATGCAACTGCTATAAATCTCTTGTGCGTTCTTAAAGGCG GGTTCAAGTTTGCATCCGATCTAAGTGAAAAAATACATAACAGCGCAGTTACACGAAGTA AAAGTATACCCATCTTCATGGACTTCATTGTTTCTAGCACATACGAGAACGATATCGTAG GGCATGAACCTCAATTTCATACTTACACTAACTTGACATCGTTTAAAGACAAGGATGTTC TCATAGTTGAGGATTTACTTGACTCAGGCACTACTCTCAGCAGACTGGTTCCTTATATTA AATCTTTTGAACCTCGTTCCGTACTTGTTGCTTGTTTGTTGGTAAAAAGAAAACAAAACT GTTCCGAGTTCCAACCAGATTTTGTTGGTTTCGAAGTTCCAAATCGGTTCATTGTTGGGT ATGCTATCGACTACAATGACTTTTTTCGGGATATACCACATATATGTTCAATAAATGATG AAGCGAAGAAAACATTTGCAATATCCAAATCAGATAAATAATGTTAAATAATAAATCCAT TTAATGATGATTAAAATGAAGTACACAATTCGGAACTTGATTTTCTTTATCTCTATAGTA CTATAGTATTTTCAATACAATTCAACTTTATTTAGATAAACGTTTGGGATTCCTAATAGA TTTATTCTATCTTATCTAATTATTCCCTTGTATACTGTTACATATTTTTTTGAAAGAGAT CAACTATTTTTTTTGTTTTTTTTTCCTTTAAGGTATGTATATTCAGTAAAGAACAGAGTA GTTTAAATAATTGTAAACTTATATTACTGTACAGTATGTTATACACTAGT



clustalw multiple alignements is not computed in this case


Copyright Thu Nov 6 12:32:27 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)