cluster # 7227

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Schistosoma mansoni
cluster # 7227 cluster # 7227 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7227#0 length = 396 sequences # 5

consensusID : consensus_7227#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 396
fasta sequence

                              [AAAGA-AGCAA-ATTATTGTTCTTATTGCG-GA-TTA--A-ACTTGATGCCTCCTCCACGTTGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACAAGTACTTACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACACTTACTGCAATAAGTCCTGGACGAGGTTTTTGGCGAAAACAATTAGACCATATATTTGCACATTTAAAACTATACACAAATAATAATTCAGAATTTCGCGCTTCTATT]

[+] EMBL CD158419             [AAAGA AGCAA ATTATTGTTCTTATTGCG GA TTA  A ACTTGATGCCTCCTCCACGTTGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACAAGTACTTACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAAAGACAGAATACCTACA                                                                                                            ]
[-] EMBL CD138002             [ AAGA AGCAA ATTATCGTTCTTATTGCG GA TTA  A ACTTGATGCCTCCTCCACGTTGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACTAGTACTTACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACAC                                                                                                           ]
[-] EMBL CD158386             [ AAGA AGCAA ATTATTGTTCTTATTGCG GA TTA  A ACTTGATGCCTCCTCCACGTTGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACAAGTAC TACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCGGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACAC                                                                                                           ]
[+] EMBL CD113904             [ gAGAGATCAACATTGTTGTTCTTATTGCG CAGTTA  ATAATTGATGCCTCCTCCACGTAGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACAAGTACTTACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACACTTACTGCAATAAGTCCTGGACGAGGTTTTTGGCGAAAACAATTAGACCATATATTTGCACATTTAAAACTATACACAAATAATAATTCAGAATTTCGCGCTTCTATT]
[+] EMBL CD113747             [                   TTCTTATTGCGCGA GTAATA AATTGATGCCTCCTCCACGTTGTACTGGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAATCTGAAAAGTCAGTTTCACAGCACAAGTACTTACAACCTGTAGTCGCAAACGTTTCTACTCAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCTCAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACACTTACTGCAATAAGTCCTGGACGAGGTTTTTGGCGAAAACAATTAGACCATATATTTGCACATTTAAAACTATACACAAATAATAATTCAGAATTTCGCGCTTCTATT]




>consensus_7227#0
AAAGAAGCAAATTATTGTTCTTATTGCGGATTAAACTTGATGCCTCCTCCACGTTGTACT
GGATGGTTTCCAATAGTTAATGGATCAAGTCATCATGAATTTGAGATTGACGGAAATCAA
TCTGAAAAGTCAGTTTCACAGCACAAGTACTTACAACCTGTAGTCGCAAACGTTTCTACT
CAAACTTATGGGATATTTTATCCAAGTTCAACAGAATTACGACGTCAAGATCAGTTAGCT
CAACATCGTTTGTCAGCTGATGTTCAACTGAGAGACAGAATACCTACACTTACTGCAATA
AGTCCTGGACGAGGTTTTTGGCGAAAACAATTAGACCATATATTTGCACATTTAAAACTA
TACACAAATAATAATTCAGAATTTCGCGCTTCTATT

clustalw multiple alignements is not computed in this case